Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 218710688

GI number: 218710688

Start: 2931841

End: 2932464

Strand: Reverse

Name: ubiX [C]

Synonym: VS_2769

Alternate gene names: 218710688

Gene position: 2932464-2931841 (Counterclockwise)

Preceding gene: 218710689

Following gene: 218710687

Centisome position: 88.88

GC content: 48.88

Gene sequence:

>624_bases
ATGACAAAACACGATAAAACGATAACTCTGGCTTTCACTGGCGCATCCGGTGCGCCTTATGGCCTGCGTTTACTTGAATG
CCTTTTGGCCGCCGATTATCAGGTCTACTTGCTGATATCATCGGCAGCGCGAGTGGTGTTGGCGACCGAGCATGAACTTA
AGTTACCTGCTGGGCCAGATGCTGCAAAACAAGCTTTGGTTAAGCATTTAGATTGCGACCCAGAAAAGCTGGTGGTGTGT
GGTAAAGATGATTGGTTCTCACCTGTTGCCTCTGGTTCAGCAGCACCGAAGCAAATGGTGGTGTGTCCATGCTCTGCGGG
AAGCTTGGCATCGATTGCTCATGGCCTATCAGATAACTTGATCGAGCGTGCAGCAGACGTGGTTATGAAAGAGCGAGGAC
AGTTGTTGTTGGTGGTTCGTGAGACGCCATTTTCTACGTTGCATTTAGAGAATATGCACAAACTCTCGACCATGGGCGTG
ACGATTATGCCTGCAGCTCCGGGTTTTTATCATCAACCTAAGTCGATTGAAGACCTGGTCGACTTTATGGTGGCACGTAT
TCTTGATCACCTTGGTATCGAGCAAGGTTTAGTGCCACGTTGGGGTTACGATCAACGTAATTGA

Upstream 100 bases:

>100_bases
AGTAATGGTGGCTTTGGTGGTATTCACCAGAAACTGTTGGATGGATTGGCACTCAAAGGCTAACGCATCCACGACCTTAT
AATTTGAAGTAATTGAGAAC

Downstream 100 bases:

>100_bases
TCCAAACTTGATGGCTTATTGTTAAAAATCGAATTACAATCCTGAACACTCATCGGGGAGCGAACCATTCAAATAATGAA
TGCGAGCTGAGATCAAGCAG

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTKHDKTITLAFTGASGAPYGLRLLECLLAADYQVYLLISSAARVVLATEHELKLPAGPDAAKQALVKHLDCDPEKLVVC
GKDDWFSPVASGSAAPKQMVVCPCSAGSLASIAHGLSDNLIERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSTMGV
TIMPAAPGFYHQPKSIEDLVDFMVARILDHLGIEQGLVPRWGYDQRN

Sequences:

>Translated_207_residues
MTKHDKTITLAFTGASGAPYGLRLLECLLAADYQVYLLISSAARVVLATEHELKLPAGPDAAKQALVKHLDCDPEKLVVC
GKDDWFSPVASGSAAPKQMVVCPCSAGSLASIAHGLSDNLIERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSTMGV
TIMPAAPGFYHQPKSIEDLVDFMVARILDHLGIEQGLVPRWGYDQRN
>Mature_206_residues
TKHDKTITLAFTGASGAPYGLRLLECLLAADYQVYLLISSAARVVLATEHELKLPAGPDAAKQALVKHLDCDPEKLVVCG
KDDWFSPVASGSAAPKQMVVCPCSAGSLASIAHGLSDNLIERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSTMGVT
IMPAAPGFYHQPKSIEDLVDFMVARILDHLGIEQGLVPRWGYDQRN

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=38.6934673366834, Blast_Score=129, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=40.8163265306122, Blast_Score=131, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22446; Mature: 22315

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKHDKTITLAFTGASGAPYGLRLLECLLAADYQVYLLISSAARVVLATEHELKLPAGPD
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEECCCCCC
AAKQALVKHLDCDPEKLVVCGKDDWFSPVASGSAAPKQMVVCPCSAGSLASIAHGLSDNL
HHHHHHHHHCCCCHHHEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHCHHHHH
IERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSTMGVTIMPAAPGFYHQPKSIEDLV
HHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHH
DFMVARILDHLGIEQGLVPRWGYDQRN
HHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKHDKTITLAFTGASGAPYGLRLLECLLAADYQVYLLISSAARVVLATEHELKLPAGPD
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEECCCCCC
AAKQALVKHLDCDPEKLVVCGKDDWFSPVASGSAAPKQMVVCPCSAGSLASIAHGLSDNL
HHHHHHHHHCCCCHHHEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHCHHHHH
IERAADVVMKERGQLLLVVRETPFSTLHLENMHKLSTMGVTIMPAAPGFYHQPKSIEDLV
HHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHH
DFMVARILDHLGIEQGLVPRWGYDQRN
HHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]