| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is npr [H]
Identifier: 218710681
GI number: 218710681
Start: 2924165
End: 2924440
Strand: Direct
Name: npr [H]
Synonym: VS_2761
Alternate gene names: 218710681
Gene position: 2924165-2924440 (Clockwise)
Preceding gene: 218710680
Following gene: 218710682
Centisome position: 88.63
GC content: 45.29
Gene sequence:
>276_bases ATGGAATTAACTCGAACTGTACTGATCCAAAATCGCTTGGGTCTTCACGCTAGAGCAGCCGTAAAATTGGTTGAGCTTGC CCAAAGTTTTGATGCAACTATCACTATCCATAGCGAAGAAGATAAAATCGCAACTGCAGACAGTGTGATGGGTTTGCTTA TGCTGGAATCAGCGCAAGGGCAACACATCACGATCCAAGCTACAGGCACCGATTCACAACAAGCACTTGATGCTGTTTGC CACCTCATTGAAGACAAGTTTGATGAGGGTGAGTAG
Upstream 100 bases:
>100_bases CAGTTTATCTAACTCAGAAAATTGGTGAATACTTCGAACAACTCGGTCATCAAGTTCAAATCAGACATGCCTCCCTAGAG AAGCACCAACAGGGCTAACC
Downstream 100 bases:
>100_bases CGAAAACGAGTCACTGACAACACTGAAGACTCAAACTTCGAACCAACCAGTATTAAATATTAGTTCTAGCTAAGTTTATG ATTTAAATAAGCCCCAGAAT
Product: phosphocarrier protein
Products: NA
Alternate protein names: Nitrogen-related HPr [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MELTRTVLIQNRLGLHARAAVKLVELAQSFDATITIHSEEDKIATADSVMGLLMLESAQGQHITIQATGTDSQQALDAVC HLIEDKFDEGE
Sequences:
>Translated_91_residues MELTRTVLIQNRLGLHARAAVKLVELAQSFDATITIHSEEDKIATADSVMGLLMLESAQGQHITIQATGTDSQQALDAVC HLIEDKFDEGE >Mature_91_residues MELTRTVLIQNRLGLHARAAVKLVELAQSFDATITIHSEEDKIATADSVMGLLMLESAQGQHITIQATGTDSQQALDAVC HLIEDKFDEGE
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the p
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1789599, Length=89, Percent_Identity=48.314606741573, Blast_Score=86, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 9904; Mature: 9904
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00369 PTS_HPR_HIS ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTRTVLIQNRLGLHARAAVKLVELAQSFDATITIHSEEDKIATADSVMGLLMLESAQG CCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHEECCCC QHITIQATGTDSQQALDAVCHLIEDKFDEGE CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MELTRTVLIQNRLGLHARAAVKLVELAQSFDATITIHSEEDKIATADSVMGLLMLESAQG CCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHEECCCC QHITIQATGTDSQQALDAVCHLIEDKFDEGE CEEEEEECCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]