Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 218710671

GI number: 218710671

Start: 2916644

End: 2917609

Strand: Direct

Name: yrbG [H]

Synonym: VS_2751

Alternate gene names: 218710671

Gene position: 2916644-2917609 (Clockwise)

Preceding gene: 218710662

Following gene: 218710672

Centisome position: 88.4

GC content: 45.03

Gene sequence:

>966_bases
ATGCTTGAAGCGATTGCGTTTCTTATTATCGGTCTAGGTTTTTTGGTGTGGAGTGCAGATAAGCTGGTCTACGGTGCCGC
TGCTCTTGCTCGCAACTTCGGAATTTCACCACTAGTTATCGGTATGACAATCTTAGCAATGGGATCTTCAGCCCCTGAAA
TGATGGTTTCTGCGACAGCAGCCCTTGATGGTAAAACAGATACGGCGGTAGGTAACGTATTAGGCTCAAACATCGCTAAC
ATCGCGCTGATTTTAGGTATTACAGCCCTTATCAAGCCATTATCGATTAGCTCTGGTGTGATTCGTCGTGAACTACCTTT
AATGATAGGTGTCACTCTATTAGCGGGCGCACTGCTTTGGGATAATCACTTAGGTTTCTATGAAGGTGTGTTGTTGTTTG
TTCTTTTTGCCGCTTTCTTATTTGCGATGCTGCAAATCAGCCGTAGTGAGAAAAAGAACGGTGATGCCTTTCTTGACGAA
CAAGAATCTGAAGTTCCTGAAGGCGTGAGCAACCCCAAAGCCGCAATGTGGGTGGTGGTTGGCCTGATTATTCTACCTCT
AGCGGCCAACATGTTGGTTGACAACGCGGTTGTAATCGCGAAGTTCTTTGGTATGAGCGACCTTGTGATTGGTTTAACCA
TTATTGCCGTTGGCACAAGTTTACCTGAACTTGCAGCATCACTAGCTGGTGTTATGAAAGGTGAAGATGATATGGCTGTG
GGTAATATCATTGGCTCAAACGTATTCAACATCCTTGCCGTAATGGGTATCCCAGGCATCCTAAACCCTTCAATCTTGAG
CGAGTTTGCAATGGGTCGTGACTTCTGGGTAATGCTAGGTGTATCACTACTTCTTGTTATCATGGCACTAGGAAAATCTC
GTAGCGTGAATCGTATCGAAGGCGGCGTGTTAATCGTGACGTTTGTGGCATATCAAAGTTACCTACTAATGAACATGTCA
GCTTAA

Upstream 100 bases:

>100_bases
CTAACTAGCAATTAATTTGTCGAGTGACTTCCCTTTTATCTAGCAACAAGTCAAAATTAGCGGTTAATTCTCCGTTTTTT
ATTAATTTTTAGGAATCATC

Downstream 100 bases:

>100_bases
TTGTTGATTTAACTTCCCGTACTTGGAGTATTTGATGTCTCAGCCATTTGATTATTGCAGCGTTGCAAAACAAGTTTTGG
AAACTGAAGTTGCAGGTCTC

Product: Ca2+/Na+ antiporter

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLEAIAFLIIGLGFLVWSADKLVYGAAALARNFGISPLVIGMTILAMGSSAPEMMVSATAALDGKTDTAVGNVLGSNIAN
IALILGITALIKPLSISSGVIRRELPLMIGVTLLAGALLWDNHLGFYEGVLLFVLFAAFLFAMLQISRSEKKNGDAFLDE
QESEVPEGVSNPKAAMWVVVGLIILPLAANMLVDNAVVIAKFFGMSDLVIGLTIIAVGTSLPELAASLAGVMKGEDDMAV
GNIIGSNVFNILAVMGIPGILNPSILSEFAMGRDFWVMLGVSLLLVIMALGKSRSVNRIEGGVLIVTFVAYQSYLLMNMS
A

Sequences:

>Translated_321_residues
MLEAIAFLIIGLGFLVWSADKLVYGAAALARNFGISPLVIGMTILAMGSSAPEMMVSATAALDGKTDTAVGNVLGSNIAN
IALILGITALIKPLSISSGVIRRELPLMIGVTLLAGALLWDNHLGFYEGVLLFVLFAAFLFAMLQISRSEKKNGDAFLDE
QESEVPEGVSNPKAAMWVVVGLIILPLAANMLVDNAVVIAKFFGMSDLVIGLTIIAVGTSLPELAASLAGVMKGEDDMAV
GNIIGSNVFNILAVMGIPGILNPSILSEFAMGRDFWVMLGVSLLLVIMALGKSRSVNRIEGGVLIVTFVAYQSYLLMNMS
A
>Mature_321_residues
MLEAIAFLIIGLGFLVWSADKLVYGAAALARNFGISPLVIGMTILAMGSSAPEMMVSATAALDGKTDTAVGNVLGSNIAN
IALILGITALIKPLSISSGVIRRELPLMIGVTLLAGALLWDNHLGFYEGVLLFVLFAAFLFAMLQISRSEKKNGDAFLDE
QESEVPEGVSNPKAAMWVVVGLIILPLAANMLVDNAVVIAKFFGMSDLVIGLTIIAVGTSLPELAASLAGVMKGEDDMAV
GNIIGSNVFNILAVMGIPGILNPSILSEFAMGRDFWVMLGVSLLLVIMALGKSRSVNRIEGGVLIVTFVAYQSYLLMNMS
A

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=316, Percent_Identity=45.8860759493671, Blast_Score=241, Evalue=5e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 33694; Mature: 33694

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAIAFLIIGLGFLVWSADKLVYGAAALARNFGISPLVIGMTILAMGSSAPEMMVSATA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
ALDGKTDTAVGNVLGSNIANIALILGITALIKPLSISSGVIRRELPLMIGVTLLAGALLW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DNHLGFYEGVLLFVLFAAFLFAMLQISRSEKKNGDAFLDEQESEVPEGVSNPKAAMWVVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHH
GLIILPLAANMLVDNAVVIAKFFGMSDLVIGLTIIAVGTSLPELAASLAGVMKGEDDMAV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
GNIIGSNVFNILAVMGIPGILNPSILSEFAMGRDFWVMLGVSLLLVIMALGKSRSVNRIE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHC
GGVLIVTFVAYQSYLLMNMSA
CCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEAIAFLIIGLGFLVWSADKLVYGAAALARNFGISPLVIGMTILAMGSSAPEMMVSATA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
ALDGKTDTAVGNVLGSNIANIALILGITALIKPLSISSGVIRRELPLMIGVTLLAGALLW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DNHLGFYEGVLLFVLFAAFLFAMLQISRSEKKNGDAFLDEQESEVPEGVSNPKAAMWVVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHH
GLIILPLAANMLVDNAVVIAKFFGMSDLVIGLTIIAVGTSLPELAASLAGVMKGEDDMAV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
GNIIGSNVFNILAVMGIPGILNPSILSEFAMGRDFWVMLGVSLLLVIMALGKSRSVNRIE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHC
GGVLIVTFVAYQSYLLMNMSA
CCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]