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The map label for this gene is ybaK [C]

Identifier: 218710581

GI number: 218710581

Start: 2818995

End: 2819456

Strand: Direct

Name: ybaK [C]

Synonym: VS_2631

Alternate gene names: 218710581

Gene position: 2818995-2819456 (Clockwise)

Preceding gene: 218710580

Following gene: 218710582

Centisome position: 85.44

GC content: 48.92

Gene sequence:

>462_bases
GTGGAAACACTGATTACACAATGGTTAGATCAACAGCAGGTGGACTATCGCCTGTTGGTGCAAAGCAAGCCAACCACCAG
CATCGAAGAGACAGCGCAAGAACGAGGTATTAATGCCTCTCAAATGGTCAAGTGCATCCTGCTTAAGGATATGGGAAACC
AGTATGCGTTGGCCTGTACTCCTGGCGATCGCTCTATCGATCCAAAGAAAGTACGCTCGGTACTGAATTGCCGTCGAATG
ACCTGCGTATCACTCGCTGATGTTGAAGCCATCACCGGCTTTAAAGCTGGATGTGTTGGGCCTATTGCTCTAAAGAGATA
CATGCCGATCATTTTTGATCCTTCCATTCAGAGCAACTCGACCGTTACCATTAGCTCGGGAGATCGAATGGCTGGCGTTG
CGTTGGATCCCAATGATCTCATAGCACTATGTGCACCGATCGTCGCTGACATCAGTCGATGA

Upstream 100 bases:

>100_bases
AACAACCTTGATGACGATGTTCAGCTTCGATTGACTGCGCAACCTGAGCAAATATGGAACATTCTGCCACTGCCTTACAG
CCTTGACGAAGAGTAGCCAC

Downstream 100 bases:

>100_bases
ACGTTTCGAACAGATCATGCTTCGCAAACTTCATTTCAATATTTCATTGAGTACATTTTTAGTGTGAACTTCGTCATAAG
AAAAACACACCCATCCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein; YbaK/EbsC Protein; EbsC Family TRNA Deacetylase; Transcription Regulator

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
METLITQWLDQQQVDYRLLVQSKPTTSIEETAQERGINASQMVKCILLKDMGNQYALACTPGDRSIDPKKVRSVLNCRRM
TCVSLADVEAITGFKAGCVGPIALKRYMPIIFDPSIQSNSTVTISSGDRMAGVALDPNDLIALCAPIVADISR

Sequences:

>Translated_153_residues
METLITQWLDQQQVDYRLLVQSKPTTSIEETAQERGINASQMVKCILLKDMGNQYALACTPGDRSIDPKKVRSVLNCRRM
TCVSLADVEAITGFKAGCVGPIALKRYMPIIFDPSIQSNSTVTISSGDRMAGVALDPNDLIALCAPIVADISR
>Mature_153_residues
METLITQWLDQQQVDYRLLVQSKPTTSIEETAQERGINASQMVKCILLKDMGNQYALACTPGDRSIDPKKVRSVLNCRRM
TCVSLADVEAITGFKAGCVGPIALKRYMPIIFDPSIQSNSTVTISSGDRMAGVALDPNDLIALCAPIVADISR

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=127, Percent_Identity=28.3464566929134, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16692; Mature: 16692

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLITQWLDQQQVDYRLLVQSKPTTSIEETAQERGINASQMVKCILLKDMGNQYALACT
CCHHHHHHHCHHCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEC
PGDRSIDPKKVRSVLNCRRMTCVSLADVEAITGFKAGCVGPIALKRYMPIIFDPSIQSNS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCC
TVTISSGDRMAGVALDPNDLIALCAPIVADISR
EEEEECCCCEEEEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METLITQWLDQQQVDYRLLVQSKPTTSIEETAQERGINASQMVKCILLKDMGNQYALACT
CCHHHHHHHCHHCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEC
PGDRSIDPKKVRSVLNCRRMTCVSLADVEAITGFKAGCVGPIALKRYMPIIFDPSIQSNS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCCCC
TVTISSGDRMAGVALDPNDLIALCAPIVADISR
EEEEECCCCEEEEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA