Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710546

Identifier: 218710546

GI number: 218710546

Start: 2782606

End: 2783406

Strand: Direct

Name: 218710546

Synonym: VS_2595

Alternate gene names: NA

Gene position: 2782606-2783406 (Clockwise)

Preceding gene: 218710545

Following gene: 218710549

Centisome position: 84.34

GC content: 40.07

Gene sequence:

>801_bases
GTGTCAGAGCTAGTCACCAAATTAATGGATTTTGGGTTTACCAAAACCGATGCGCTTGTTTATATTAATTTACTCAAAAA
TGGCCAATCCAGCGGATATAAAATCGCGAAAGAGATCTCTATCTCCCGCTCTTCTGTTTACTCGTCTATCGATAACCTTT
ACGCCAATGGCTACATTTTCATGTCTGATGGCGACACTAAAGAGTACGAAGCTAAATCACCAGACTTGATTTTCAGCCAG
ATAGAAAAAAAGACAGTCACCAATATTAATTTCCTTAAATCAGAATTATCTAAGATGATGCTGAAAGAGGAAAAAGAGTT
CGTTTACAACGTATCGGGGTTCGACAACTTACTTCAAAAGGCCAAGGAAATCATTAATCAGGCAAATCTAGAAATTTACC
TGAATACCGATTTTAACCTTGAGTTGTTTGGCAAAGAATTATGCGACGCCGTGGAACGTGGAGTACGAGTGATTGGCTTT
TCATTCAACAAAATGGCGAGCCCACATGAAAAGATAGAACTACATTCGCGTTCTGAAAATGAAGAAACCGAATACCCTTC
ACACCGCTTTATGTGCGTAGCCGATATGAAGCTCGCCCTCATGTTCTCACACCGTGAAGAAACCTTAGGTTTGTATGCAA
ATAATCGCTTAATTGTAAAAATGATAGCAGAGCATATTCACAGCGATATTTACCTAACAGAATACGAGCGCCTGGCTCCG
AATCAGCACCAACACGTCAGAGTAAATACGATTCACGAACAGCATAATGCTATGGTACTCGACGAGCTTAAGAAGCACTA
A

Upstream 100 bases:

>100_bases
TCTCATCGCTGAAAAAAATCACAACAATCATTTACGCTCGTCGTGACAAGAATGGTAACCTTAGAAGGAGAAGATATTGA
ATAGTTTCAGAGGACAACCC

Downstream 100 bases:

>100_bases
CTCAGCAGATCGAATTCAATAATAAGATACGAACAAAGGTCTAGTAATAGGCCTTTCGGGGAAAGAACTTTTAACGGGAA
TCTATTTAATCCAAAGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSELVTKLMDFGFTKTDALVYINLLKNGQSSGYKIAKEISISRSSVYSSIDNLYANGYIFMSDGDTKEYEAKSPDLIFSQ
IEKKTVTNINFLKSELSKMMLKEEKEFVYNVSGFDNLLQKAKEIINQANLEIYLNTDFNLELFGKELCDAVERGVRVIGF
SFNKMASPHEKIELHSRSENEETEYPSHRFMCVADMKLALMFSHREETLGLYANNRLIVKMIAEHIHSDIYLTEYERLAP
NQHQHVRVNTIHEQHNAMVLDELKKH

Sequences:

>Translated_266_residues
MSELVTKLMDFGFTKTDALVYINLLKNGQSSGYKIAKEISISRSSVYSSIDNLYANGYIFMSDGDTKEYEAKSPDLIFSQ
IEKKTVTNINFLKSELSKMMLKEEKEFVYNVSGFDNLLQKAKEIINQANLEIYLNTDFNLELFGKELCDAVERGVRVIGF
SFNKMASPHEKIELHSRSENEETEYPSHRFMCVADMKLALMFSHREETLGLYANNRLIVKMIAEHIHSDIYLTEYERLAP
NQHQHVRVNTIHEQHNAMVLDELKKH
>Mature_265_residues
SELVTKLMDFGFTKTDALVYINLLKNGQSSGYKIAKEISISRSSVYSSIDNLYANGYIFMSDGDTKEYEAKSPDLIFSQI
EKKTVTNINFLKSELSKMMLKEEKEFVYNVSGFDNLLQKAKEIINQANLEIYLNTDFNLELFGKELCDAVERGVRVIGFS
FNKMASPHEKIELHSRSENEETEYPSHRFMCVADMKLALMFSHREETLGLYANNRLIVKMIAEHIHSDIYLTEYERLAPN
QHQHVRVNTIHEQHNAMVLDELKKH

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30781; Mature: 30649

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELVTKLMDFGFTKTDALVYINLLKNGQSSGYKIAKEISISRSSVYSSIDNLYANGYIF
CHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEE
MSDGDTKEYEAKSPDLIFSQIEKKTVTNINFLKSELSKMMLKEEKEFVYNVSGFDNLLQK
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
AKEIINQANLEIYLNTDFNLELFGKELCDAVERGVRVIGFSFNKMASPHEKIELHSRSEN
HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHEEECCCCCC
EETEYPSHRFMCVADMKLALMFSHREETLGLYANNRLIVKMIAEHIHSDIYLTEYERLAP
CCCCCCCCEEEEEECCEEEHHHHCCHHHEEEEECCCHHHHHHHHHHCCCEEEEHHHHHCC
NQHQHVRVNTIHEQHNAMVLDELKKH
CCCCEEEEEEEHHHHCHHHHHHHHCC
>Mature Secondary Structure 
SELVTKLMDFGFTKTDALVYINLLKNGQSSGYKIAKEISISRSSVYSSIDNLYANGYIF
HHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEE
MSDGDTKEYEAKSPDLIFSQIEKKTVTNINFLKSELSKMMLKEEKEFVYNVSGFDNLLQK
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
AKEIINQANLEIYLNTDFNLELFGKELCDAVERGVRVIGFSFNKMASPHEKIELHSRSEN
HHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHEEECCCCCC
EETEYPSHRFMCVADMKLALMFSHREETLGLYANNRLIVKMIAEHIHSDIYLTEYERLAP
CCCCCCCCEEEEEECCEEEHHHHCCHHHEEEEECCCHHHHHHHHHHCCCEEEEHHHHHCC
NQHQHVRVNTIHEQHNAMVLDELKKH
CCCCEEEEEEEHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA