| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is mdxG [H]
Identifier: 218710543
GI number: 218710543
Start: 2778789
End: 2779658
Strand: Direct
Name: mdxG [H]
Synonym: VS_2592
Alternate gene names: 218710543
Gene position: 2778789-2779658 (Clockwise)
Preceding gene: 218710542
Following gene: 218710544
Centisome position: 84.22
GC content: 42.18
Gene sequence:
>870_bases ATGGCTAATTTAAATAGTACGAATAAGTTAATTAACATGGACAAATACATTGGCAAAATAGGCACCCTAGTCGTGTACCT ATTTCTCATTGCCAACGCATTATTAGTACTTGGACCAGTGATTTGGACAGTGCTAGCTTCATTCAAAACAGGGAATAACT TATTCAGTTCTTCTTTCACAAGTATTGACTTTACGCTCGACCACTACCGCGCATTGTTCACGGACACACCCTATTTAGAC TGGTATAAAAACACCTTTCTTCTCGCGACAGCGAATATGGTTATCTCACTGGTTGTCGTGACTATTTCAGCGTTTGTGTT CTCTCGCTACCGCTTCAATGGTAAGCGCAACATTATGATGAGCATTCTTGTATTGCAGATGTTCCCGGCCTTTCTTTCGA TGACGGCTATCTACATCTTGCTATCAAAAATGGGATTGATTGATACCTATGCTGGCTTGTTATTTGTGTATGTAACGGGC TCATTACCATTCATGATTTGGTTGGTGAAAGGTTATTTCGATGCCATTCCCACTTCATTAGATGAAGCAGCAAAAATTGA TGGCGCAGGCCACATGACGATTTTCCTCGAGATCATTCTCCCTCTCGCGAAACCTATCTTAGTGTTTGTTGGTTTAGTGT CTTTCACCGCACCTTGGATGGACTTCATTTTACCTACGCTGATCTTACGCAGCGAAGAAAAAATGACGCTAGCCATCGGT ATTTTCAGTTGGATTTCATCTAACTCAGCGGAGAATTTCACGCTGTTTGCCGCGGGTTCATTATTGGTTGCAGTGCCCAT CACTTTGCTATTTGTTGCGACTCAAAAACACATTACTACCGGCCTCGTCAGCGGCGCAGTTAAAGAATAA
Upstream 100 bases:
>100_bases GCTTCGGTTATCTCAATCATTATCTTCTTGTTCTTGTCTGGTATTGCGATATGGCAATTCAGCCGCATGAAGTCATTCAA AGACGATGTAGGTATGTAAC
Downstream 100 bases:
>100_bases TAATTAGGGATGATTTCCGCTATGGCTATTACAAATTCAGTTATCAACAAACCGATTACAAAAAGCTCGCTGACTCACTC AGCAAAAAGTGCAGACAGCT
Product: maltodextrin transport system permease MalD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MANLNSTNKLINMDKYIGKIGTLVVYLFLIANALLVLGPVIWTVLASFKTGNNLFSSSFTSIDFTLDHYRALFTDTPYLD WYKNTFLLATANMVISLVVVTISAFVFSRYRFNGKRNIMMSILVLQMFPAFLSMTAIYILLSKMGLIDTYAGLLFVYVTG SLPFMIWLVKGYFDAIPTSLDEAAKIDGAGHMTIFLEIILPLAKPILVFVGLVSFTAPWMDFILPTLILRSEEKMTLAIG IFSWISSNSAENFTLFAAGSLLVAVPITLLFVATQKHITTGLVSGAVKE
Sequences:
>Translated_289_residues MANLNSTNKLINMDKYIGKIGTLVVYLFLIANALLVLGPVIWTVLASFKTGNNLFSSSFTSIDFTLDHYRALFTDTPYLD WYKNTFLLATANMVISLVVVTISAFVFSRYRFNGKRNIMMSILVLQMFPAFLSMTAIYILLSKMGLIDTYAGLLFVYVTG SLPFMIWLVKGYFDAIPTSLDEAAKIDGAGHMTIFLEIILPLAKPILVFVGLVSFTAPWMDFILPTLILRSEEKMTLAIG IFSWISSNSAENFTLFAAGSLLVAVPITLLFVATQKHITTGLVSGAVKE >Mature_288_residues ANLNSTNKLINMDKYIGKIGTLVVYLFLIANALLVLGPVIWTVLASFKTGNNLFSSSFTSIDFTLDHYRALFTDTPYLDW YKNTFLLATANMVISLVVVTISAFVFSRYRFNGKRNIMMSILVLQMFPAFLSMTAIYILLSKMGLIDTYAGLLFVYVTGS LPFMIWLVKGYFDAIPTSLDEAAKIDGAGHMTIFLEIILPLAKPILVFVGLVSFTAPWMDFILPTLILRSEEKMTLAIGI FSWISSNSAENFTLFAAGSLLVAVPITLLFVATQKHITTGLVSGAVKE
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG3833
COG function: function code G; ABC-type maltose transport systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790464, Length=271, Percent_Identity=31.7343173431734, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1787571, Length=288, Percent_Identity=28.4722222222222, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1789860, Length=215, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787368, Length=179, Percent_Identity=27.9329608938547, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31985; Mature: 31854
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLNSTNKLINMDKYIGKIGTLVVYLFLIANALLVLGPVIWTVLASFKTGNNLFSSSFT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC SIDFTLDHYRALFTDTPYLDWYKNTFLLATANMVISLVVVTISAFVFSRYRFNGKRNIMM EEEEHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SILVLQMFPAFLSMTAIYILLSKMGLIDTYAGLLFVYVTGSLPFMIWLVKGYFDAIPTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH DEAAKIDGAGHMTIFLEIILPLAKPILVFVGLVSFTAPWMDFILPTLILRSEEKMTLAIG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH IFSWISSNSAENFTLFAAGSLLVAVPITLLFVATQKHITTGLVSGAVKE HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ANLNSTNKLINMDKYIGKIGTLVVYLFLIANALLVLGPVIWTVLASFKTGNNLFSSSFT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC SIDFTLDHYRALFTDTPYLDWYKNTFLLATANMVISLVVVTISAFVFSRYRFNGKRNIMM EEEEHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SILVLQMFPAFLSMTAIYILLSKMGLIDTYAGLLFVYVTGSLPFMIWLVKGYFDAIPTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH DEAAKIDGAGHMTIFLEIILPLAKPILVFVGLVSFTAPWMDFILPTLILRSEEKMTLAIG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH IFSWISSNSAENFTLFAAGSLLVAVPITLLFVATQKHITTGLVSGAVKE HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]