| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ganP [H]
Identifier: 218710542
GI number: 218710542
Start: 2777504
End: 2778787
Strand: Direct
Name: ganP [H]
Synonym: VS_2591
Alternate gene names: 218710542
Gene position: 2777504-2778787 (Clockwise)
Preceding gene: 218710541
Following gene: 218710543
Centisome position: 84.18
GC content: 43.38
Gene sequence:
>1284_bases ATGTTGTTAACAGAGAATCAGCCGGCATCGCGAATGCCCGCTTCACTCCTTATTATGGGGAGTACACAGATCGTAAAAGG TCATTGGATAAAAGGCGGTGTATTTTTAGCCATGCAGCTAATCACATTGTTGATTCTCCCGGAGTTGTTGGCCTCGCTAA AAGGCTTAGTCACTTTAGGAGATGTCGCTCAAGTTCGTGAAGGCTTTAAAATATTACAGGGCGATAACTCGGTCTTTATG TTGGTCGAAGGGGTCATAGCCCTACTCTACAGCTTCTTATTCATCTGTCTGTACATCGCTAATGTCCAAGATGCAAAAGT CAGCCTTAAGTCACGACTGAACCTTCGAGAACAATTTAAAGACATTTACGACCAAAAGTTCGCGTTCATCATGCTATCGC CAGCTTTTATTGCCAGTATCGCATTCATTATTTTACCAATCATAATTACGGTACTCGTCTCTTTCACTAACTATTCGGCA CCTCATCATATCCCACCAAGAAACCTTGTAGATTGGGTGGGGTTTAAAAACTTTGTTTCACTATTTGAACTGAAAATATG GTCGAGCACTTTCTTCGGTGTCGCTTCTTGGACGGTTCTGTGGGCATTTTTTGCCACCATATGTACTTGTGGGTTTGGTT TTTTACTGGCGCTTGCGCTACAAAATCGAAACATTAAAGCAAAAAAAGCATGGCGCTTTATCTTTATTCTCCCTTATGCC ATTCCGGCTTTCGTGACCTTATTGATGTTCCGCTTGCTACTGAATGGTATTGGACCAGTCAACGCAACGTTAAACTCGTG GGGCTTTGATTCGATTGCCTTCTTATCAGACCCTTTCACCGCAAAAATTACCGTTATCGCGGTGAGTGTTTGGGTTGGCG CACCTTACTTTATGCTGCTTATTGCAGGGGCACTGACTAACATTTCAAGCGAACTTTATGAAGCCAGTGAAGTCGATGGT GCAAGCAAGTTCCAGCAATTTAAAGAAATCACCCTGCCTATGGTGTTGCACCAAGTGGCCCCATCGTTGGTCATGACCTT TGCCCATAACTTCAATAACTTTGGGGCGATTTACCTGTTAACCGAAGGGGGTCCTATCAACCCTGAATATCGATTCGCAG GACATACCGACATTTTGATCACTTGGATTTACAAGCTCACGCTCGACTTCCAGCAGTATCAAATCGCTTCGGTTATCTCA ATCATTATCTTCTTGTTCTTGTCTGGTATTGCGATATGGCAATTCAGCCGCATGAAGTCATTCAAAGACGATGTAGGTAT GTAA
Upstream 100 bases:
>100_bases GCGACTTAGCTCATGCGCTGTGTCATAAAGCCACAGCGCTAGTTCAGGGCGTGACCAGAAAACGAATACATAACGACAAC CTAAACAATAGAGATAAACA
Downstream 100 bases:
>100_bases CATGGCTAATTTAAATAGTACGAATAAGTTAATTAACATGGACAAATACATTGGCAAAATAGGCACCCTAGTCGTGTACC TATTTCTCATTGCCAACGCA
Product: maltodextrin transport system permease MalC
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MLLTENQPASRMPASLLIMGSTQIVKGHWIKGGVFLAMQLITLLILPELLASLKGLVTLGDVAQVREGFKILQGDNSVFM LVEGVIALLYSFLFICLYIANVQDAKVSLKSRLNLREQFKDIYDQKFAFIMLSPAFIASIAFIILPIIITVLVSFTNYSA PHHIPPRNLVDWVGFKNFVSLFELKIWSSTFFGVASWTVLWAFFATICTCGFGFLLALALQNRNIKAKKAWRFIFILPYA IPAFVTLLMFRLLLNGIGPVNATLNSWGFDSIAFLSDPFTAKITVIAVSVWVGAPYFMLLIAGALTNISSELYEASEVDG ASKFQQFKEITLPMVLHQVAPSLVMTFAHNFNNFGAIYLLTEGGPINPEYRFAGHTDILITWIYKLTLDFQQYQIASVIS IIIFLFLSGIAIWQFSRMKSFKDDVGM
Sequences:
>Translated_427_residues MLLTENQPASRMPASLLIMGSTQIVKGHWIKGGVFLAMQLITLLILPELLASLKGLVTLGDVAQVREGFKILQGDNSVFM LVEGVIALLYSFLFICLYIANVQDAKVSLKSRLNLREQFKDIYDQKFAFIMLSPAFIASIAFIILPIIITVLVSFTNYSA PHHIPPRNLVDWVGFKNFVSLFELKIWSSTFFGVASWTVLWAFFATICTCGFGFLLALALQNRNIKAKKAWRFIFILPYA IPAFVTLLMFRLLLNGIGPVNATLNSWGFDSIAFLSDPFTAKITVIAVSVWVGAPYFMLLIAGALTNISSELYEASEVDG ASKFQQFKEITLPMVLHQVAPSLVMTFAHNFNNFGAIYLLTEGGPINPEYRFAGHTDILITWIYKLTLDFQQYQIASVIS IIIFLFLSGIAIWQFSRMKSFKDDVGM >Mature_427_residues MLLTENQPASRMPASLLIMGSTQIVKGHWIKGGVFLAMQLITLLILPELLASLKGLVTLGDVAQVREGFKILQGDNSVFM LVEGVIALLYSFLFICLYIANVQDAKVSLKSRLNLREQFKDIYDQKFAFIMLSPAFIASIAFIILPIIITVLVSFTNYSA PHHIPPRNLVDWVGFKNFVSLFELKIWSSTFFGVASWTVLWAFFATICTCGFGFLLALALQNRNIKAKKAWRFIFILPYA IPAFVTLLMFRLLLNGIGPVNATLNSWGFDSIAFLSDPFTAKITVIAVSVWVGAPYFMLLIAGALTNISSELYEASEVDG ASKFQQFKEITLPMVLHQVAPSLVMTFAHNFNNFGAIYLLTEGGPINPEYRFAGHTDILITWIYKLTLDFQQYQIASVIS IIIFLFLSGIAIWQFSRMKSFKDDVGM
Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=37.007874015748, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=26.0700389105058, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR007829 [H]
Pfam domain/function: PF00528 BPD_transp_1; PF05154 TM2 [H]
EC number: NA
Molecular weight: Translated: 47788; Mature: 47788
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTENQPASRMPASLLIMGSTQIVKGHWIKGGVFLAMQLITLLILPELLASLKGLVTLG CCCCCCCCCCCCCCEEEEECCCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVAQVREGFKILQGDNSVFMLVEGVIALLYSFLFICLYIANVQDAKVSLKSRLNLREQFK HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH DIYDQKFAFIMLSPAFIASIAFIILPIIITVLVSFTNYSAPHHIPPRNLVDWVGFKNFVS HHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFELKIWSSTFFGVASWTVLWAFFATICTCGFGFLLALALQNRNIKAKKAWRFIFILPYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHHH IPAFVTLLMFRLLLNGIGPVNATLNSWGFDSIAFLSDPFTAKITVIAVSVWVGAPYFMLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEHHHCCHHHHHH IAGALTNISSELYEASEVDGASKFQQFKEITLPMVLHQVAPSLVMTFAHNFNNFGAIYLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE TEGGPINPEYRFAGHTDILITWIYKLTLDFQQYQIASVISIIIFLFLSGIAIWQFSRMKS ECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKDDVGM HHHHCCC >Mature Secondary Structure MLLTENQPASRMPASLLIMGSTQIVKGHWIKGGVFLAMQLITLLILPELLASLKGLVTLG CCCCCCCCCCCCCCEEEEECCCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVAQVREGFKILQGDNSVFMLVEGVIALLYSFLFICLYIANVQDAKVSLKSRLNLREQFK HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHH DIYDQKFAFIMLSPAFIASIAFIILPIIITVLVSFTNYSAPHHIPPRNLVDWVGFKNFVS HHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFELKIWSSTFFGVASWTVLWAFFATICTCGFGFLLALALQNRNIKAKKAWRFIFILPYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHHH IPAFVTLLMFRLLLNGIGPVNATLNSWGFDSIAFLSDPFTAKITVIAVSVWVGAPYFMLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEHHHCCHHHHHH IAGALTNISSELYEASEVDGASKFQQFKEITLPMVLHQVAPSLVMTFAHNFNNFGAIYLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE TEGGPINPEYRFAGHTDILITWIYKLTLDFQQYQIASVISIIIFLFLSGIAIWQFSRMKS ECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKDDVGM HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]