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The map label for this gene is yacF [C]

Identifier: 218710514

GI number: 218710514

Start: 2744480

End: 2745220

Strand: Direct

Name: yacF [C]

Synonym: VS_2553

Alternate gene names: 218710514

Gene position: 2744480-2745220 (Clockwise)

Preceding gene: 218710513

Following gene: 218710515

Centisome position: 83.18

GC content: 41.97

Gene sequence:

>741_bases
ATGATCACCCACAAATTTGAACATCCTCTAAATGAGAAAACACGCATCTACTTAAGAGTTGAATCGCTCTTGAGGCAGTT
ACACCTGTCTTCTGCATTTTCCGATGCTCAACAGTATCAACTCTTTTTCCGTTCTATCTTTGATCTGATTGAAATATTCG
AACAGATACAACTTAAGAGCGAACTCGCAAAAGATATTGAGAAACAGCGTGTAACCTATAAAAGTTGGTTAGATGTTGAA
GGTGTCGATCAAGAGATGCTGACATCATTGCTCAATGATATTAGTCATATCTATCGTGAACTGATGCAGGCGGAACGTTT
TGGGCAATCATTAAAGGAAGACCGCTTCCTTAGCGCCATTCGTCAACGCTTTAACTTGCCAGGTGGCTCATGTTGCTTTG
ATTTACCGGCTCTACATTATTGGCTTCATCTTCCTCTTGATAAGAGAGTTAGAGATGCTGAGACATGGATGGATAGCCTA
CAGCCTCTGTATGAAGCGCTAACACTATGGTTGAAGCTCACCAGAGAGACAGGTCACTTTAAGGATCAGATCGCTCGTAC
AGGTTTCTTCCAAAGCGATGCTGATGAAGCGAATATCCTTCGCCTTTCAATTCCAATGCAGTACGGTGCCTACCCGATGA
TCTCGGGACATAAAAACCGTTTCGCTATTAAATTTATGAGCTTTGAAACTGGGCAAGCCTGTACTCAAGATATTGAATTT
GAGTTGGCTATCTGCAGCTAA

Upstream 100 bases:

>100_bases
AAGAACTTTTGCCTCAAATCACAGATTTACATCAAAAGTATCTGGCAATCAGTGCAGTAGATGGGTCAGAATAGAACAAT
GTTGAATGAAGGTTTGCTCG

Downstream 100 bases:

>100_bases
TTCATTTCCTTTATTGTTTGGCTTGAGTCCTCACTCGAGCCTAAACTCACTATTATTACACCTTCAAATTAAGAATCACT
ATGTCGAAGAAAATCACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MITHKFEHPLNEKTRIYLRVESLLRQLHLSSAFSDAQQYQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRVTYKSWLDVE
GVDQEMLTSLLNDISHIYRELMQAERFGQSLKEDRFLSAIRQRFNLPGGSCCFDLPALHYWLHLPLDKRVRDAETWMDSL
QPLYEALTLWLKLTRETGHFKDQIARTGFFQSDADEANILRLSIPMQYGAYPMISGHKNRFAIKFMSFETGQACTQDIEF
ELAICS

Sequences:

>Translated_246_residues
MITHKFEHPLNEKTRIYLRVESLLRQLHLSSAFSDAQQYQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRVTYKSWLDVE
GVDQEMLTSLLNDISHIYRELMQAERFGQSLKEDRFLSAIRQRFNLPGGSCCFDLPALHYWLHLPLDKRVRDAETWMDSL
QPLYEALTLWLKLTRETGHFKDQIARTGFFQSDADEANILRLSIPMQYGAYPMISGHKNRFAIKFMSFETGQACTQDIEF
ELAICS
>Mature_246_residues
MITHKFEHPLNEKTRIYLRVESLLRQLHLSSAFSDAQQYQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRVTYKSWLDVE
GVDQEMLTSLLNDISHIYRELMQAERFGQSLKEDRFLSAIRQRFNLPGGSCCFDLPALHYWLHLPLDKRVRDAETWMDSL
QPLYEALTLWLKLTRETGHFKDQIARTGFFQSDADEANILRLSIPMQYGAYPMISGHKNRFAIKFMSFETGQACTQDIEF
ELAICS

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family

Homologues:

Organism=Escherichia coli, GI1786291, Length=242, Percent_Identity=42.9752066115703, Blast_Score=220, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2553_VIBSL (B7VK24)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418135.1
- ProteinModelPortal:   B7VK24
- GeneID:   7162083
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2553
- HOGENOM:   HBG432810
- OMA:   CYPTISG
- ProtClustDB:   PRK05287
- HAMAP:   MF_01092
- InterPro:   IPR023144
- InterPro:   IPR009777
- Gene3D:   G3DSA:1.10.274.20

Pfam domain/function: PF07072 DUF1342

EC number: NA

Molecular weight: Translated: 28944; Mature: 28944

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITHKFEHPLNEKTRIYLRVESLLRQLHLSSAFSDAQQYQLFFRSIFDLIEIFEQIQLKS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAKDIEKQRVTYKSWLDVEGVDQEMLTSLLNDISHIYRELMQAERFGQSLKEDRFLSAI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRFNLPGGSCCFDLPALHYWLHLPLDKRVRDAETWMDSLQPLYEALTLWLKLTRETGHF
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KDQIARTGFFQSDADEANILRLSIPMQYGAYPMISGHKNRFAIKFMSFETGQACTQDIEF
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEE
ELAICS
EEEECC
>Mature Secondary Structure
MITHKFEHPLNEKTRIYLRVESLLRQLHLSSAFSDAQQYQLFFRSIFDLIEIFEQIQLKS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAKDIEKQRVTYKSWLDVEGVDQEMLTSLLNDISHIYRELMQAERFGQSLKEDRFLSAI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRFNLPGGSCCFDLPALHYWLHLPLDKRVRDAETWMDSLQPLYEALTLWLKLTRETGHF
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KDQIARTGFFQSDADEANILRLSIPMQYGAYPMISGHKNRFAIKFMSFETGQACTQDIEF
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEE
ELAICS
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA