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The map label for this gene is yadH [H]

Identifier: 218710495

GI number: 218710495

Start: 2723682

End: 2724470

Strand: Reverse

Name: yadH [H]

Synonym: VS_2534

Alternate gene names: 218710495

Gene position: 2724470-2723682 (Counterclockwise)

Preceding gene: 218710496

Following gene: 218710487

Centisome position: 82.58

GC content: 45.5

Gene sequence:

>789_bases
GTGAGGGGAATAAATAATATGTACAGCCTATATTGGACCGCTTTCTGCAGCTTGTTGACCAAAGAGATCAATCGCTTCAC
GCGTATCTGGGTGCAAACTTTGGTACCGCCAGCGATTACCATGACGCTTTACTTCATCATCTTCGGTAACCTGATTGGTG
CGCGTATTGGTGAAATGAACGGCTTTAGCTACATGGAATACATTGTGCCCGGTCTGATCATGATGTCGGTGATCACCAAC
TCATATTCCAACGTTGCTTCATCGTTCTTTAGTGCCAAATTCCAGAAGAATATTGAAGAGCTGCTTGTAGCACCTGTTCC
TAACTACGTGATTATCGCCGGTTTCGTGATGGGTGGTGTGGTGCGTGGCTTGTTAGTGGGCACTATCGTCACCTTTGTAT
CGCTGTTCTTTGTTGACCTTCAAGTCGACCACTGGGGCGTGATCATTGCGACAGTATTTCTAACGTCGGTTGTGTTTGCT
CTGGGTGGTTTGATCAACGCGGTATTCGCACGTACGTTTGATGATATTTCTATTATCCCAACCTTCATTTTAACGCCGCT
GACATATCTCGGTGGTGTGTTCTACTCGATCAGTCTATTGCCTGAATTCTGGCAAGGTGTATCGAAGTTGAACCCTATCG
TGTATATGGTAAATGCGTTTAGATATGGCTTTTTGGGTGTGTCTGATGTGGGTATTGTGACGTCGTTTGGCGTACTAGGT
GTGTTTACTGTCGTGCTGTATGGCATTGCACATTACTTAGTTACAAAGGGGATCGGCTTACGTAGCTAA

Upstream 100 bases:

>100_bases
TTGAATACCATCTTTGATCAATTGAGTGAGCAGCAGGTAAAAGTTCTCTCTATGCGTAACAAAGCAAACCGCCTAGAAGA
GCTATTTGTGAGTATCGTCC

Downstream 100 bases:

>100_bases
CTTTTGGTTATCCAAGAGCTATTAGTTATCTAGGAGCTATTAATTATCCTGAATCGCAGGCAAAGAAAAAGGTCGATATT
ACATCGACCTTTTTTATGTT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRGINNMYSLYWTAFCSLLTKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGARIGEMNGFSYMEYIVPGLIMMSVITN
SYSNVASSFFSAKFQKNIEELLVAPVPNYVIIAGFVMGGVVRGLLVGTIVTFVSLFFVDLQVDHWGVIIATVFLTSVVFA
LGGLINAVFARTFDDISIIPTFILTPLTYLGGVFYSISLLPEFWQGVSKLNPIVYMVNAFRYGFLGVSDVGIVTSFGVLG
VFTVVLYGIAHYLVTKGIGLRS

Sequences:

>Translated_262_residues
MRGINNMYSLYWTAFCSLLTKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGARIGEMNGFSYMEYIVPGLIMMSVITN
SYSNVASSFFSAKFQKNIEELLVAPVPNYVIIAGFVMGGVVRGLLVGTIVTFVSLFFVDLQVDHWGVIIATVFLTSVVFA
LGGLINAVFARTFDDISIIPTFILTPLTYLGGVFYSISLLPEFWQGVSKLNPIVYMVNAFRYGFLGVSDVGIVTSFGVLG
VFTVVLYGIAHYLVTKGIGLRS
>Mature_262_residues
MRGINNMYSLYWTAFCSLLTKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGARIGEMNGFSYMEYIVPGLIMMSVITN
SYSNVASSFFSAKFQKNIEELLVAPVPNYVIIAGFVMGGVVRGLLVGTIVTFVSLFFVDLQVDHWGVIIATVFLTSVVFA
LGGLINAVFARTFDDISIIPTFILTPLTYLGGVFYSISLLPEFWQGVSKLNPIVYMVNAFRYGFLGVSDVGIVTSFGVLG
VFTVVLYGIAHYLVTKGIGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=70.3125, Blast_Score=364, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28944; Mature: 28944

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]