Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710340

Identifier: 218710340

GI number: 218710340

Start: 2543650

End: 2544552

Strand: Direct

Name: 218710340

Synonym: VS_2376

Alternate gene names: NA

Gene position: 2543650-2544552 (Clockwise)

Preceding gene: 218710339

Following gene: 218710346

Centisome position: 77.1

GC content: 44.63

Gene sequence:

>903_bases
ATGAAAAAAACAATGACACTGCTAGCGACTTCTCTCTTTGCTCTTTATGGCTGTGGCGGCGGAGGTGGCTCTTCTTCATC
AGGCTCAACGGGAGCTACTCAGTTCGACTACCCGATCAACAACTCTCAGTTTGCACCTCAAGCGACTACTGCATTGAACT
ACGCATTTACCACTGATGCACAGGCTGAAGGCGACATAAAAATGAACTTCATGCCGCTAAGTGGTGAGCAGGTCATCGCT
GCATTAGAGGCAGAAACCGGTAATGAAGGTCTTATCCAAGTCATCAATGATTTGATCAATTACGGTATTACAGAATTCTA
TGCTTCAGAGGAAGTCATCACCAATGATGAAGGCACGCAAGAAAGCGGGACCATCTACTTTTCAGGTCCCGACCGTGGAC
TACACGAAATCACCAAAACTTACTTCATTGGCAGCCAATACATCACAAGAATGATGTACAGCAGTCCACGGTTCCGTTTA
AGAGGGACAGATGTAAAAGAAAACAACCCGATTATTGATATCAGTGAAGACACTGTTTCACTGCGAGTCACGCTAGATGG
AAAAGCAGTCGCTGCTATGTTGAGTGACTTTGAGGATCACCAGTGGGTGAAATCACTGCCTACTAATGCTTCATGCAAAG
TAACGTGGCAGCAAGAAATTAATGAAACAGGTGTACGTAAAAGCTTCACTGTTTCGGGTAAATCCATAGAAACTGCGAAC
CTTACGGAGAAAAACACCTATTACATTAGCTGTGTCGGTATGGACTCGACAGAGTTTGGCACAACGTCTGAGCGCTGGTT
CAACCCAAGCATCGGCCTGATTGAACAAATTGAATTGATGTCAGTGGAGCAATCCACCATTCAAGAATCAACAGCTAAAC
TGACTTCAATCGAAAAAGCATAG

Upstream 100 bases:

>100_bases
TCTTATGTGACTTCGTTTTTTGCCCTATTCACTCCTCAAACAATAGCATTCCTAAAAACATCGGGCCCACCAAGGGCTTC
CAAATTTAGGAATGTTCAAC

Downstream 100 bases:

>100_bases
TTTTATTAACTGAAGCAGACTCAATGTAAAAAGGCTTTGGGAAGCACTCCAAAGCCTTTGTAGAGGCCTAATTCTTAAGG
GGAATAGAATTAGGCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKTMTLLATSLFALYGCGGGGGSSSSGSTGATQFDYPINNSQFAPQATTALNYAFTTDAQAEGDIKMNFMPLSGEQVIA
ALEAETGNEGLIQVINDLINYGITEFYASEEVITNDEGTQESGTIYFSGPDRGLHEITKTYFIGSQYITRMMYSSPRFRL
RGTDVKENNPIIDISEDTVSLRVTLDGKAVAAMLSDFEDHQWVKSLPTNASCKVTWQQEINETGVRKSFTVSGKSIETAN
LTEKNTYYISCVGMDSTEFGTTSERWFNPSIGLIEQIELMSVEQSTIQESTAKLTSIEKA

Sequences:

>Translated_300_residues
MKKTMTLLATSLFALYGCGGGGGSSSSGSTGATQFDYPINNSQFAPQATTALNYAFTTDAQAEGDIKMNFMPLSGEQVIA
ALEAETGNEGLIQVINDLINYGITEFYASEEVITNDEGTQESGTIYFSGPDRGLHEITKTYFIGSQYITRMMYSSPRFRL
RGTDVKENNPIIDISEDTVSLRVTLDGKAVAAMLSDFEDHQWVKSLPTNASCKVTWQQEINETGVRKSFTVSGKSIETAN
LTEKNTYYISCVGMDSTEFGTTSERWFNPSIGLIEQIELMSVEQSTIQESTAKLTSIEKA
>Mature_300_residues
MKKTMTLLATSLFALYGCGGGGGSSSSGSTGATQFDYPINNSQFAPQATTALNYAFTTDAQAEGDIKMNFMPLSGEQVIA
ALEAETGNEGLIQVINDLINYGITEFYASEEVITNDEGTQESGTIYFSGPDRGLHEITKTYFIGSQYITRMMYSSPRFRL
RGTDVKENNPIIDISEDTVSLRVTLDGKAVAAMLSDFEDHQWVKSLPTNASCKVTWQQEINETGVRKSFTVSGKSIETAN
LTEKNTYYISCVGMDSTEFGTTSERWFNPSIGLIEQIELMSVEQSTIQESTAKLTSIEKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32810; Mature: 32810

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTMTLLATSLFALYGCGGGGGSSSSGSTGATQFDYPINNSQFAPQATTALNYAFTTDA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEEEEEECCC
QAEGDIKMNFMPLSGEQVIAALEAETGNEGLIQVINDLINYGITEFYASEEVITNDEGTQ
CCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC
ESGTIYFSGPDRGLHEITKTYFIGSQYITRMMYSSPRFRLRGTDVKENNPIIDISEDTVS
CCCEEEECCCCCCHHHHHHHHEECHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCEEE
LRVTLDGKAVAAMLSDFEDHQWVKSLPTNASCKVTWQQEINETGVRKSFTVSGKSIETAN
EEEEECCHHHHHHHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEECCCEEEECC
LTEKNTYYISCVGMDSTEFGTTSERWFNPSIGLIEQIELMSVEQSTIQESTAKLTSIEKA
CCCCCEEEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKTMTLLATSLFALYGCGGGGGSSSSGSTGATQFDYPINNSQFAPQATTALNYAFTTDA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEEEEEECCC
QAEGDIKMNFMPLSGEQVIAALEAETGNEGLIQVINDLINYGITEFYASEEVITNDEGTQ
CCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC
ESGTIYFSGPDRGLHEITKTYFIGSQYITRMMYSSPRFRLRGTDVKENNPIIDISEDTVS
CCCEEEECCCCCCHHHHHHHHEECHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCEEE
LRVTLDGKAVAAMLSDFEDHQWVKSLPTNASCKVTWQQEINETGVRKSFTVSGKSIETAN
EEEEECCHHHHHHHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEECCCEEEECC
LTEKNTYYISCVGMDSTEFGTTSERWFNPSIGLIEQIELMSVEQSTIQESTAKLTSIEKA
CCCCCEEEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA