| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yaeP [C]
Identifier: 218710334
GI number: 218710334
Start: 2538279
End: 2538482
Strand: Direct
Name: yaeP [C]
Synonym: VS_2370
Alternate gene names: 218710334
Gene position: 2538279-2538482 (Clockwise)
Preceding gene: 218710333
Following gene: 218710335
Centisome position: 76.93
GC content: 44.61
Gene sequence:
>204_bases ATGAAAGTATACGATTGTTGTGATTTGGTGCGTGAACTGTATTCTCAAATTGGCAGTGGCGACCAAGGCTATATCCCTAA AGCGATCACCTGCGCGGTAAAAACATTGAACGACCTTGCTGCAGATGAATCTCTTCCTAAAGAAGCAAGAGATCGTGCTG CATTTGCCGCAGCGAATCTACTGATCTCAGATTTCGAGGACTAA
Upstream 100 bases:
>100_bases GAGCAAGAACAAACTAACTCGGAACTTAGTCAGATCCACTTTGTTTTTGCTTATCTCTATGTGTATATTGAGATCAGTTA TCATTTGGTTAGGTATAAAA
Downstream 100 bases:
>100_bases TATGAACCTCGCTAACTTTGAAAAGATGGATCCTGTGATGTTGATGAGCATCGTCAACATGAAGCTGCGTGACGACTTCG GTGGTGATTTAGATCGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MKVYDCCDLVRELYSQIGSGDQGYIPKAITCAVKTLNDLAADESLPKEARDRAAFAAANLLISDFED
Sequences:
>Translated_67_residues MKVYDCCDLVRELYSQIGSGDQGYIPKAITCAVKTLNDLAADESLPKEARDRAAFAAANLLISDFED >Mature_67_residues MKVYDCCDLVRELYSQIGSGDQGYIPKAITCAVKTLNDLAADESLPKEARDRAAFAAANLLISDFED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0253 family
Homologues:
Organism=Escherichia coli, GI48994876, Length=59, Percent_Identity=52.5423728813559, Blast_Score=76, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2370_VIBSL (B7VIT4)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002417955.1 - GeneID: 7161908 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2370 - HOGENOM: HBG298416 - OMA: ISDFEDK - ProtClustDB: PRK04964 - HAMAP: MF_01064 - InterPro: IPR009624 - ProDom: PD054643
Pfam domain/function: PF06786 UPF0253
EC number: NA
Molecular weight: Translated: 7314; Mature: 7314
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYDCCDLVRELYSQIGSGDQGYIPKAITCAVKTLNDLAADESLPKEARDRAAFAAANL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LISDFED HHHCCCC >Mature Secondary Structure MKVYDCCDLVRELYSQIGSGDQGYIPKAITCAVKTLNDLAADESLPKEARDRAAFAAANL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LISDFED HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA