| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yaeH [C]
Identifier: 218710321
GI number: 218710321
Start: 2526796
End: 2527179
Strand: Direct
Name: yaeH [C]
Synonym: VS_2356
Alternate gene names: 218710321
Gene position: 2526796-2527179 (Clockwise)
Preceding gene: 218710320
Following gene: 218710324
Centisome position: 76.59
GC content: 42.45
Gene sequence:
>384_bases ATGTATCCAAACCTCACTGGCTTAGGTATCCACGAACCTAAACAGATTGAACGTTACTCCCTTCGCCAAGAAGCGCACAA AGATATCCTGAAGATTTACTTTCGTAAGCAGAAAGGTGAACTGTTCGCGAAAAGCGTTAAGTTTAAGTACCCACGACAAG TAAAAAGTGTGCTTGTTAGCGGCGGCAATAATCAATACAAAGAAGTGACAGAGATTAACCGCAACCTCACTCTTGTGATT GATGAACTCAACAAGATCACCAAACCGACGCCAACGGCTGAGGTGGATTTGAAGCAGAAGATCCTTACTGACTTACGCCA TCTAGAAAAAGTGGTATCAAGCAAGATCGCAGAGATCGAAGTCGATCTAGAAAAACTTAAATGA
Upstream 100 bases:
>100_bases AATCAATTCACAGATATCAACTATCTAGCTCGTCGTTAGGCTGCTACATTGATCAAGTCAATTACATAAAAGTATTACAT TCATAACCTAGAGGTCGCTT
Downstream 100 bases:
>100_bases TCCCGCGATTAACTGTTAGCGATTAACTATCAACTAACCAACATTAGTTATGTTGTTTAGGTCGCACAGACGTCAAAAAG GGCTGATATCACTATCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MYPNLTGLGIHEPKQIERYSLRQEAHKDILKIYFRKQKGELFAKSVKFKYPRQVKSVLVSGGNNQYKEVTEINRNLTLVI DELNKITKPTPTAEVDLKQKILTDLRHLEKVVSSKIAEIEVDLEKLK
Sequences:
>Translated_127_residues MYPNLTGLGIHEPKQIERYSLRQEAHKDILKIYFRKQKGELFAKSVKFKYPRQVKSVLVSGGNNQYKEVTEINRNLTLVI DELNKITKPTPTAEVDLKQKILTDLRHLEKVVSSKIAEIEVDLEKLK >Mature_127_residues MYPNLTGLGIHEPKQIERYSLRQEAHKDILKIYFRKQKGELFAKSVKFKYPRQVKSVLVSGGNNQYKEVTEINRNLTLVI DELNKITKPTPTAEVDLKQKILTDLRHLEKVVSSKIAEIEVDLEKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family
Homologues:
Organism=Escherichia coli, GI1786359, Length=126, Percent_Identity=65.0793650793651, Blast_Score=159, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2356_VIBSL (B7VIS1)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002417942.1 - GeneID: 7161895 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2356 - HOGENOM: HBG298613 - OMA: NLRYVIE - ProtClustDB: PRK13677 - HAMAP: MF_01519 - InterPro: IPR020911
Pfam domain/function: PF11944 DUF3461
EC number: NA
Molecular weight: Translated: 14746; Mature: 14746
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPNLTGLGIHEPKQIERYSLRQEAHKDILKIYFRKQKGELFAKSVKFKYPRQVKSVLVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GGNNQYKEVTEINRNLTLVIDELNKITKPTPTAEVDLKQKILTDLRHLEKVVSSKIAEIE CCCCHHHHHHHHCCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLEKLK HHHHHCC >Mature Secondary Structure MYPNLTGLGIHEPKQIERYSLRQEAHKDILKIYFRKQKGELFAKSVKFKYPRQVKSVLVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GGNNQYKEVTEINRNLTLVIDELNKITKPTPTAEVDLKQKILTDLRHLEKVVSSKIAEIE CCCCHHHHHHHHCCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLEKLK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA