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The map label for this gene is glnD

Identifier: 218710320

GI number: 218710320

Start: 2523956

End: 2526577

Strand: Direct

Name: glnD

Synonym: VS_2355

Alternate gene names: 218710320

Gene position: 2523956-2526577 (Clockwise)

Preceding gene: 218710319

Following gene: 218710321

Centisome position: 76.5

GC content: 47.22

Gene sequence:

>2622_bases
ATGCCTTATCAATGCCCTATTACGTTCAATGACGAACAACTTGAAATCTGCGAATTAAAAAATCAGCTCGAAATCTTCAC
GCAGTATCAAAAGAGCGAATTTCTAAATCATCATCCAGTTACCGATTTGGTTCTGCTGCGCTCCGAATACATGGATTTGC
TTCTCAATCGTTTATGGGAACATTTCGGATTTAGCAAACTGCCTCATATTGCGTTGGTCGCAGTAGGCGGCTATGGCCGT
GGTGAACTACACCCTTTATCCGATATTGATATTCTCATCGTCTCGCAAAGAACTCTACCATCAGCACTAGGTGAGAAAGT
CAGTCAATTCATCACCCTATTGTGGGATTTGAAGCTAGAAGTCGGCCACGCAGTGCGTACCATTGCTGAATGTATTGAGA
TTGGTAGTGACGATTTAACGGTTGCGACTAACCTGCAAGAATCGCGCTTACTGTGTGGCAGTGAAGACACCTTCCAAGAG
CTGAAACTAAAGATTCATTCCGATTCATTTTGGCCAAGTGAGACCTTTTACAAAGCCAAAATTCAAGAACAAAGAGAGCG
TCATGCTCGGTACCACGACACCACCTACAATCTAGAACCGGATATCAAATCAACTCCGGGCGGACTCAGAGACATCCACA
CTCTGAGTTGGGTAGCACGTCGCCACTTCGGTGCGACTTCTTTGTTGGAAATGAGCAAGTATGGCTTTCTTACCGATGCT
GAATATCGTGAACTCGTGGAGTGCCAAGACTTCTTATGGCGCGTTCGCTTTGCACTGCACATAGAGCTGCGCCGCTACGA
CAATCGTCTTACCTTTGCGCATCAGGCTCAAGTAGCCGAACACCTTGGTTACACTGGTGAGGGCAATCGCGGCGTAGAAA
TGATGATGAAGGAGTTCTACCGAACACTTCGTCGTGTAGCAGAGCTCAACAAAATGCTGCTTAAGCTGTTTGACCAAGCA
ATCATTAACGGTGGTCAAACACAAGAAGCCGAGATTCTCGACAATGACTTCCAACGTCGAGGTTCATTAATCGAAGCGCG
TAAGCCAGCCCTATTCCAAGCACGACCAGAAACGATTCTCGATATGTTTATCCATATCGCGAATGACTCGACGATCGAAG
GGGTAAGCCCCCCAACATTACGACAACTGCGAACGGCGCGTCGCCGATTGAACCGCTTCCTGCATACCATTCCTGAAGCT
CGTGACAAGTTCATGGATTTAGTTCGCCACCCCAACGCACTGCACAAAGCTTTTAGCTTGATGCATAAACTGGGCGTGCT
ATCGGCGTACTTACCGCAATGGAGCCAAATTGTCGGCCAAATGCAGTTTGATCTGTTCCACGTTTACACCGTGGATGAAC
ACAGTATTCGCCTGCTCAAGCACATCAACCGCTTTAGCCAAGTAGAGAACCACGACAAACACCCAATTTGTTGTGAAGTG
TACCCTCGAGTTCAGAAAAAAGAACTCCTGATCCTGGCCGCTATCTTCCACGACATAGGAAAAGGCCGTGGTGGAGACCA
CTCCGAGATCGGTGCTGTTGAAGCTTACTCTTTCTGTATTGAGCATGGGCTATCGAAGCCTGAAGCCAAACAAGTTGCGT
GGCTAGTACAAAACCACCTGTTAATGTCAGTGACCGCTCAGCGCCGTGATATCTACGATCCGGATGTGATTACCGAATTC
GCCAAAAAAGTTCGCGATGAAGAGTCACTTGAGCTGCTGGTTTGCTTAACTGTCGCTGATATCTGTGCAACCAATCCAGA
ACTATGGAACAGCTGGAAACGTACCCTACTCGCAGAGCTATTCCATTCTACGCAGCGAGCACTGCGTCGCGGCTTGGAAA
ACCCAGTCGATGTCAGAGACCGTATTCGTCACAATCAACAAATGGCATCTGCACTGCTGCGTAAAGAAGGTTTTTCCGCT
CGTGAAATTGAAGTGTTGTGGCAGCGTTTTAAAGCTGACTATTTTTTGCGTCATACACACACTCAAATTGCTTGGCACTG
TGAGCACCTACTTCGCTTAGAAGATCCGAGCCAACCTTTAGTACTTATCAGCAAAAAAGCAACACGAGGTGGTACAGAGG
TATTCGTATACTGTAAAGACCAAGCGGCACTTTTCGCAACCGTTGTTGCCGAGCTCGACAGACGTAACTTTAACGTTCAC
GACGCACAGGTCATGGTCAGTAAAGATGGTCACGTTTTGGATACCTTTATCGTACTTGATCAGCATGGTGAAGCGATTGA
TGAAGCAAGACACAAAGCCGTTGCGAAACATCTAACTCATGTTCTAGCTGATGGCCGTCCAACTAAGATTAAGACACGTC
GCACGCCTCGAAACTTGCAGCATTTCAAGGTAAAAACTCGGGTTGAGTTCCTACCAACTAAGAGCAAGAAGCGCACCTTG
ATGGAGTTGAGAGCTCTTGATACACCGGGGTTGTTGGCTCAAGTCGGCGCAACCTTTGCTGAGTTAGACATCAATTTGCA
CGGCGCTAAAATTACCACCATCGGCGAACGTGCAGAAGATTTGTTTATTCTGACCAGTGACGCGGGAGGAAGGTTGTCTG
AAGAACAAGAACAAGCCTTAAGAGAAAGATTAACCGAACACGTTTCAGAACTCGCACCTTAG

Upstream 100 bases:

>100_bases
CGCATTGCCGAGGATATTTTTTTATCCGCTCAATTTCGATTTTGCATCAGCTTCTGTTAAATTGTTTACTATTCTCATTT
GCTTGCACGGATAGCAGACT

Downstream 100 bases:

>100_bases
AAAGCTAATTTAGAGCTAGAAGTAAGTTGTGACTAGGAAACAAGTTTAGCTCTTGGAGCTGCTTTAATAGCCAAATAAGT
GTGGGCAAAGATAGAGAGCG

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme

Number of amino acids: Translated: 873; Mature: 872

Protein sequence:

>873_residues
MPYQCPITFNDEQLEICELKNQLEIFTQYQKSEFLNHHPVTDLVLLRSEYMDLLLNRLWEHFGFSKLPHIALVAVGGYGR
GELHPLSDIDILIVSQRTLPSALGEKVSQFITLLWDLKLEVGHAVRTIAECIEIGSDDLTVATNLQESRLLCGSEDTFQE
LKLKIHSDSFWPSETFYKAKIQEQRERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLLEMSKYGFLTDA
EYRELVECQDFLWRVRFALHIELRRYDNRLTFAHQAQVAEHLGYTGEGNRGVEMMMKEFYRTLRRVAELNKMLLKLFDQA
IINGGQTQEAEILDNDFQRRGSLIEARKPALFQARPETILDMFIHIANDSTIEGVSPPTLRQLRTARRRLNRFLHTIPEA
RDKFMDLVRHPNALHKAFSLMHKLGVLSAYLPQWSQIVGQMQFDLFHVYTVDEHSIRLLKHINRFSQVENHDKHPICCEV
YPRVQKKELLILAAIFHDIGKGRGGDHSEIGAVEAYSFCIEHGLSKPEAKQVAWLVQNHLLMSVTAQRRDIYDPDVITEF
AKKVRDEESLELLVCLTVADICATNPELWNSWKRTLLAELFHSTQRALRRGLENPVDVRDRIRHNQQMASALLRKEGFSA
REIEVLWQRFKADYFLRHTHTQIAWHCEHLLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVH
DAQVMVSKDGHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVEFLPTKSKKRTL
MELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQALRERLTEHVSELAP

Sequences:

>Translated_873_residues
MPYQCPITFNDEQLEICELKNQLEIFTQYQKSEFLNHHPVTDLVLLRSEYMDLLLNRLWEHFGFSKLPHIALVAVGGYGR
GELHPLSDIDILIVSQRTLPSALGEKVSQFITLLWDLKLEVGHAVRTIAECIEIGSDDLTVATNLQESRLLCGSEDTFQE
LKLKIHSDSFWPSETFYKAKIQEQRERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLLEMSKYGFLTDA
EYRELVECQDFLWRVRFALHIELRRYDNRLTFAHQAQVAEHLGYTGEGNRGVEMMMKEFYRTLRRVAELNKMLLKLFDQA
IINGGQTQEAEILDNDFQRRGSLIEARKPALFQARPETILDMFIHIANDSTIEGVSPPTLRQLRTARRRLNRFLHTIPEA
RDKFMDLVRHPNALHKAFSLMHKLGVLSAYLPQWSQIVGQMQFDLFHVYTVDEHSIRLLKHINRFSQVENHDKHPICCEV
YPRVQKKELLILAAIFHDIGKGRGGDHSEIGAVEAYSFCIEHGLSKPEAKQVAWLVQNHLLMSVTAQRRDIYDPDVITEF
AKKVRDEESLELLVCLTVADICATNPELWNSWKRTLLAELFHSTQRALRRGLENPVDVRDRIRHNQQMASALLRKEGFSA
REIEVLWQRFKADYFLRHTHTQIAWHCEHLLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVH
DAQVMVSKDGHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVEFLPTKSKKRTL
MELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQALRERLTEHVSELAP
>Mature_872_residues
PYQCPITFNDEQLEICELKNQLEIFTQYQKSEFLNHHPVTDLVLLRSEYMDLLLNRLWEHFGFSKLPHIALVAVGGYGRG
ELHPLSDIDILIVSQRTLPSALGEKVSQFITLLWDLKLEVGHAVRTIAECIEIGSDDLTVATNLQESRLLCGSEDTFQEL
KLKIHSDSFWPSETFYKAKIQEQRERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLLEMSKYGFLTDAE
YRELVECQDFLWRVRFALHIELRRYDNRLTFAHQAQVAEHLGYTGEGNRGVEMMMKEFYRTLRRVAELNKMLLKLFDQAI
INGGQTQEAEILDNDFQRRGSLIEARKPALFQARPETILDMFIHIANDSTIEGVSPPTLRQLRTARRRLNRFLHTIPEAR
DKFMDLVRHPNALHKAFSLMHKLGVLSAYLPQWSQIVGQMQFDLFHVYTVDEHSIRLLKHINRFSQVENHDKHPICCEVY
PRVQKKELLILAAIFHDIGKGRGGDHSEIGAVEAYSFCIEHGLSKPEAKQVAWLVQNHLLMSVTAQRRDIYDPDVITEFA
KKVRDEESLELLVCLTVADICATNPELWNSWKRTLLAELFHSTQRALRRGLENPVDVRDRIRHNQQMASALLRKEGFSAR
EIEVLWQRFKADYFLRHTHTQIAWHCEHLLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHD
AQVMVSKDGHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVEFLPTKSKKRTLM
ELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQALRERLTEHVSELAP

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family

Homologues:

Organism=Escherichia coli, GI1786363, Length=866, Percent_Identity=53.4642032332563, Blast_Score=947, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLND_VIBSL (B7VIS0)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002417941.1
- ProteinModelPortal:   B7VIS0
- GeneID:   7161894
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2355
- HOGENOM:   HBG687872
- OMA:   MQHDLFH
- ProtClustDB:   PRK05007
- HAMAP:   MF_00277
- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546
- PANTHER:   PTHR13734:SF1
- PIRSF:   PIRSF006288
- SMART:   SM00471
- TIGRFAMs:   TIGR01693

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2

EC number: =2.7.7.59

Molecular weight: Translated: 100640; Mature: 100508

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYQCPITFNDEQLEICELKNQLEIFTQYQKSEFLNHHPVTDLVLLRSEYMDLLLNRLWE
CCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
HFGFSKLPHIALVAVGGYGRGELHPLSDIDILIVSQRTLPSALGEKVSQFITLLWDLKLE
HCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VGHAVRTIAECIEIGSDDLTVATNLQESRLLCGSEDTFQELKLKIHSDSFWPSETFYKAK
HHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHEEEECCCCCCCCHHHHHH
IQEQRERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLLEMSKYGFLTDA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
EYRELVECQDFLWRVRFALHIELRRYDNRLTFAHQAQVAEHLGYTGEGNRGVEMMMKEFY
HHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RTLRRVAELNKMLLKLFDQAIINGGQTQEAEILDNDFQRRGSLIEARKPALFQARPETIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCHHCCCHHHHH
DMFIHIANDSTIEGVSPPTLRQLRTARRRLNRFLHTIPEARDKFMDLVRHPNALHKAFSL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MHKLGVLSAYLPQWSQIVGQMQFDLFHVYTVDEHSIRLLKHINRFSQVENHDKHPICCEV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEC
YPRVQKKELLILAAIFHDIGKGRGGDHSEIGAVEAYSFCIEHGLSKPEAKQVAWLVQNHL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LMSVTAQRRDIYDPDVITEFAKKVRDEESLELLVCLTVADICATNPELWNSWKRTLLAEL
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FHSTQRALRRGLENPVDVRDRIRHNQQMASALLRKEGFSAREIEVLWQRFKADYFLRHTH
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TQIAWHCEHLLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVH
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCC
DAQVMVSKDGHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQ
CEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHH
HFKVKTRVEFLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAED
HHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHEEEEEEECCCEEEECCCCCCE
LFILTSDAGGRLSEEQEQALRERLTEHVSELAP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYQCPITFNDEQLEICELKNQLEIFTQYQKSEFLNHHPVTDLVLLRSEYMDLLLNRLWE
CEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
HFGFSKLPHIALVAVGGYGRGELHPLSDIDILIVSQRTLPSALGEKVSQFITLLWDLKLE
HCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VGHAVRTIAECIEIGSDDLTVATNLQESRLLCGSEDTFQELKLKIHSDSFWPSETFYKAK
HHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHHHHEEEECCCCCCCCHHHHHH
IQEQRERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLLEMSKYGFLTDA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
EYRELVECQDFLWRVRFALHIELRRYDNRLTFAHQAQVAEHLGYTGEGNRGVEMMMKEFY
HHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RTLRRVAELNKMLLKLFDQAIINGGQTQEAEILDNDFQRRGSLIEARKPALFQARPETIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCHHCCCHHHHH
DMFIHIANDSTIEGVSPPTLRQLRTARRRLNRFLHTIPEARDKFMDLVRHPNALHKAFSL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MHKLGVLSAYLPQWSQIVGQMQFDLFHVYTVDEHSIRLLKHINRFSQVENHDKHPICCEV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEC
YPRVQKKELLILAAIFHDIGKGRGGDHSEIGAVEAYSFCIEHGLSKPEAKQVAWLVQNHL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LMSVTAQRRDIYDPDVITEFAKKVRDEESLELLVCLTVADICATNPELWNSWKRTLLAEL
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FHSTQRALRRGLENPVDVRDRIRHNQQMASALLRKEGFSAREIEVLWQRFKADYFLRHTH
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TQIAWHCEHLLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVH
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCC
DAQVMVSKDGHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQ
CEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHH
HFKVKTRVEFLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAED
HHHHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHEEEEEEECCCEEEECCCCCCE
LFILTSDAGGRLSEEQEQALRERLTEHVSELAP
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA