| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is kefC [H]
Identifier: 218710230
GI number: 218710230
Start: 2432028
End: 2433614
Strand: Direct
Name: kefC [H]
Synonym: VS_2263
Alternate gene names: 218710230
Gene position: 2432028-2433614 (Clockwise)
Preceding gene: 218710229
Following gene: 218710231
Centisome position: 73.71
GC content: 44.61
Gene sequence:
>1587_bases ATGGAACTTATATTAATATCCACTGCGTTTATCGCAGGATTTATTGCTTTAAAATGCCACCTCCCCCCATTAGTTGGTTT TTTGGTTGCAGGTTTCGGGCTTTATGCCCTTGGCTTTGAAACCAATGACACCATCATTACTTTGGCTGACCTTGGTGTCA CCCTTCTCTTATTTACTATTGGCTTAAAGCTGGACATCAAAACCCTACTCTCTAAAGAGATCTGGGCTGGCGCAACAATC CACAATCTTTTATCCACTCTGTTTTTTGCAGCCGCTCTATTTGGTTTTAAGTTTCTAGGTATTTCATCTCTAGCAGCCAT GTCAATAGAACAGATCGTTCTACTCGGTTTTGCTCTTTCATTTTCTAGTACTGTATTTGCGGTCAAGTCTCTACAAGAGA AAGGGGAAATGAATGCTACCTATGGCACACTAGCGATTGGCATTCTGGTCATGCAAGATATCTTTGCTGTCGTATTCTTG ACTGCATCGACGGGCAAAATTCCAGAGTGGTATGCGATCGCACTGTTCGCTTTGCCTTTCTTTCGCCCATTGTTCTACAA AGTCCTCGATTGGGTTGGGCACGGTGAAATGTTGGTGCTATTCGGTATCTTCTTCGCATTAGTTGTTGGTGCTGGCTTGT TCCAGTTTGTAGGAGTAAAACCAGACTTAGGTGCCCTTATCCTAGGTATGCTGTTAGCCGGTCACCCAAAAGCTTCAGAG CTATCGAAGTCGCTGTTTAACCTTAAAGAGCTTTTCCTCGTCTGCTTCTTCTTGAATATTGGCTTGTCAGAACAGCCAAC TATTCAGGGTTTTATGCTTGCAGTATTGTTCTTATTGTTACTGCCAGTGAAAGGCGTTCTGTACTTCTTGGTACTAAACC GATTCAAGTTCCGTGTTCGAACCTCCCTACTCACTTCTTTGTCACTGTTTAACTACAGTGAATTTGGCCTCATCGTCGGT GGCCTTGCTTTTAAGATGGGCTGGATGTCTGGCGACATCTTGGTAGCAGTGGCTATAGCCGTTTCATTGTCGTTCTTAAT CGCTGCACCTCTCAACAAAGCGGGTCACAAACTTTATCAACAATCAGGTCGCTGGTTAAAAGAGCACGCTGCTGAGAAGC TCCACCAACGTGACAAACGAATTGACCCAGGTCGGGCTCAGGTTCTAATTCTTGGCATGGGACGCATTGGTACTGGTGCC TACGACGAATTACGCTCACGCTACGGCAAAGTGAGTTTAGGTGTCGAAGTTCGTGAAGACGCGGCACATAACCACAGAAG CCATGGCAGAAACGTTATTTCTGGTGACGCAACTGACCCGGATTTCTGGGAACGAATTTTAGACACAGCAAACGTAAAAC TGGTGATCTTGGCTATGCCTCACCACCAGGGTAATCAAACCGCCTTAGAACAATTAAAATCACGAAACTTTAAAGGTCAA ATAGCGGCAATTGCCGAATATCCAGATCAGCTCGAAACACTGAAAGAGAATGGCGTCGATGCGGCATTTAACATTTACAG CGAAGCTGGCAGCGGTTTTGCCCGACATGTTTGTGAACAATTGAATCCGAACATCAATAAAATATAA
Upstream 100 bases:
>100_bases AGCTTCTTGAAGACTAAAGAAAACAATTCTGATTTTCCGCGGGCCGTGTTTGTATAAACACGGCCCGTTTTTTTAAGCTA GGGAACTACAACAACAAGTT
Downstream 100 bases:
>100_bases TATTCAACATGTTCCATTCAACCTCTCAAAATTGCGCTTTTTTTGCACTTTTGAGAGGTTTTTGTTCAAAAAACCAACCG CAATTAGACACCACTCACCA
Product: putative glutathione-regulated potassium-efflux system protein KefB
Products: NA
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MELILISTAFIAGFIALKCHLPPLVGFLVAGFGLYALGFETNDTIITLADLGVTLLLFTIGLKLDIKTLLSKEIWAGATI HNLLSTLFFAAALFGFKFLGISSLAAMSIEQIVLLGFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFL TASTGKIPEWYAIALFALPFFRPLFYKVLDWVGHGEMLVLFGIFFALVVGAGLFQFVGVKPDLGALILGMLLAGHPKASE LSKSLFNLKELFLVCFFLNIGLSEQPTIQGFMLAVLFLLLLPVKGVLYFLVLNRFKFRVRTSLLTSLSLFNYSEFGLIVG GLAFKMGWMSGDILVAVAIAVSLSFLIAAPLNKAGHKLYQQSGRWLKEHAAEKLHQRDKRIDPGRAQVLILGMGRIGTGA YDELRSRYGKVSLGVEVREDAAHNHRSHGRNVISGDATDPDFWERILDTANVKLVILAMPHHQGNQTALEQLKSRNFKGQ IAAIAEYPDQLETLKENGVDAAFNIYSEAGSGFARHVCEQLNPNINKI
Sequences:
>Translated_528_residues MELILISTAFIAGFIALKCHLPPLVGFLVAGFGLYALGFETNDTIITLADLGVTLLLFTIGLKLDIKTLLSKEIWAGATI HNLLSTLFFAAALFGFKFLGISSLAAMSIEQIVLLGFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFL TASTGKIPEWYAIALFALPFFRPLFYKVLDWVGHGEMLVLFGIFFALVVGAGLFQFVGVKPDLGALILGMLLAGHPKASE LSKSLFNLKELFLVCFFLNIGLSEQPTIQGFMLAVLFLLLLPVKGVLYFLVLNRFKFRVRTSLLTSLSLFNYSEFGLIVG GLAFKMGWMSGDILVAVAIAVSLSFLIAAPLNKAGHKLYQQSGRWLKEHAAEKLHQRDKRIDPGRAQVLILGMGRIGTGA YDELRSRYGKVSLGVEVREDAAHNHRSHGRNVISGDATDPDFWERILDTANVKLVILAMPHHQGNQTALEQLKSRNFKGQ IAAIAEYPDQLETLKENGVDAAFNIYSEAGSGFARHVCEQLNPNINKI >Mature_528_residues MELILISTAFIAGFIALKCHLPPLVGFLVAGFGLYALGFETNDTIITLADLGVTLLLFTIGLKLDIKTLLSKEIWAGATI HNLLSTLFFAAALFGFKFLGISSLAAMSIEQIVLLGFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFL TASTGKIPEWYAIALFALPFFRPLFYKVLDWVGHGEMLVLFGIFFALVVGAGLFQFVGVKPDLGALILGMLLAGHPKASE LSKSLFNLKELFLVCFFLNIGLSEQPTIQGFMLAVLFLLLLPVKGVLYFLVLNRFKFRVRTSLLTSLSLFNYSEFGLIVG GLAFKMGWMSGDILVAVAIAVSLSFLIAAPLNKAGHKLYQQSGRWLKEHAAEKLHQRDKRIDPGRAQVLILGMGRIGTGA YDELRSRYGKVSLGVEVREDAAHNHRSHGRNVISGDATDPDFWERILDTANVKLVILAMPHHQGNQTALEQLKSRNFKGQ IAAIAEYPDQLETLKENGVDAAFNIYSEAGSGFARHVCEQLNPNINKI
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786685, Length=532, Percent_Identity=25, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786232, Length=534, Percent_Identity=26.5917602996255, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1789749, Length=494, Percent_Identity=25.9109311740891, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 57813; Mature: 57813
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELILISTAFIAGFIALKCHLPPLVGFLVAGFGLYALGFETNDTIITLADLGVTLLLFTI CEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHH GLKLDIKTLLSKEIWAGATIHNLLSTLFFAAALFGFKFLGISSLAAMSIEQIVLLGFALS CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTASTGKIPEWYAIALFALPF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FRPLFYKVLDWVGHGEMLVLFGIFFALVVGAGLFQFVGVKPDLGALILGMLLAGHPKASE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LSKSLFNLKELFLVCFFLNIGLSEQPTIQGFMLAVLFLLLLPVKGVLYFLVLNRFKFRVR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLTSLSLFNYSEFGLIVGGLAFKMGWMSGDILVAVAIAVSLSFLIAAPLNKAGHKLYQ HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QSGRWLKEHAAEKLHQRDKRIDPGRAQVLILGMGRIGTGAYDELRSRYGKVSLGVEVRED HHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEECEEECHH AAHNHRSHGRNVISGDATDPDFWERILDTANVKLVILAMPHHQGNQTALEQLKSRNFKGQ HHHCHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC IAAIAEYPDQLETLKENGVDAAFNIYSEAGSGFARHVCEQLNPNINKI CHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MELILISTAFIAGFIALKCHLPPLVGFLVAGFGLYALGFETNDTIITLADLGVTLLLFTI CEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHH GLKLDIKTLLSKEIWAGATIHNLLSTLFFAAALFGFKFLGISSLAAMSIEQIVLLGFALS CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTASTGKIPEWYAIALFALPF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FRPLFYKVLDWVGHGEMLVLFGIFFALVVGAGLFQFVGVKPDLGALILGMLLAGHPKASE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH LSKSLFNLKELFLVCFFLNIGLSEQPTIQGFMLAVLFLLLLPVKGVLYFLVLNRFKFRVR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLTSLSLFNYSEFGLIVGGLAFKMGWMSGDILVAVAIAVSLSFLIAAPLNKAGHKLYQ HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QSGRWLKEHAAEKLHQRDKRIDPGRAQVLILGMGRIGTGAYDELRSRYGKVSLGVEVRED HHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEECEEECHH AAHNHRSHGRNVISGDATDPDFWERILDTANVKLVILAMPHHQGNQTALEQLKSRNFKGQ HHHCHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC IAAIAEYPDQLETLKENGVDAAFNIYSEAGSGFARHVCEQLNPNINKI CHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA