| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is feoB [H]
Identifier: 218710201
GI number: 218710201
Start: 2397245
End: 2399518
Strand: Reverse
Name: feoB [H]
Synonym: VS_2233
Alternate gene names: 218710201
Gene position: 2399518-2397245 (Counterclockwise)
Preceding gene: 218710202
Following gene: 218710200
Centisome position: 72.73
GC content: 43.98
Gene sequence:
>2274_bases ATGGATTATCAAGTTCTTACTGTTGGTAACCCTAATAGTGGTAAAACAACATTATTTAACGCATTAACTGGCGCAAAACA GCACGTTGGTAACTGGGTTGGTGTGACCGTAGAAAAGAAAACCGGTTTATATTCGCACGCTGGTGATCAATTTCAGTTAA CGGATTTACCAGGCATTTATGCACTAGACAGTGGCAATGATGCAAACAGTATCGATGAGTCTATTGCATCACGCGCCGTG CTTACTCACCCAGCGGACGTGATCATCAATGTTGTTGATGCTAGCTGTTTGGAAAGAAGCTTATACATGACATTACAATT GCGAGAGTTGGGTCGCCCAATGATCGTTGTATTGAACAAAATGGATGTATTAAAGCGTGAGCGTCAGGTGATTAATCTTA AGGCTCTAGAAAAAGAGCTAGGTTGCCCGGTTCTAAGCTTGTCAGCAAACGATAAAGGACAAGTGGTTCGTTTTAAAGAG CGTTTGCATAAGCTTCTGGTTCAAGGTGTGAGTCTTGATCCTATCTCTATTGATTACGATGTCGCGTTAGAAGCTCTTAT TCCTTCTGTTGAGTCACAATTTGATGATGCTGACGTATCTCACCGAGCACTAGCGATTCGTGCTTTAGAAAATGATTACT TGGTATTGAATGGTTTGGCTCCACAAACTCGCACTCAAATTGATAGTGTGCGTCTTGGTGCCGATTTCGATATTGATCTT GCTGTTGCTGACGCTAAATACACTTTCTTACATGAACTTTGTAAACGAGTTCGTCGCAGCGAAGGCAAACTGAGCCGTAA TTTCACAGAGAAAGCCGATCAATTCATTTTGAATAAATGGGTCGGGATTCCTTTCTTCTTCGTCATCATGTACCTAATGT TTATGTTCTCTATCAATATCGGTAGCGCGTTTATCGACTTCTTCGATATTGGTGTTGGCGCAATATTAGTTGATGGCGGA CATCACTTATTAGATGGTCACTTACCGGTTTGGCTAGTCACCGTTCTTGCTGATGGTATTGGTGGTGGTATCCAAACGGT TGCGACCTTTATTCCGGTTATTGCCGCGCTTTACTTGTTCTTAGCGGTACTAGAAAGTTCAGGCTACATGGCCCGCGCTG CATTTGTACTGGATAAAGTGATGCAGAAAATTGGCTTACCGGGCAAAGCATTTGTACCACTTGTTCTGGGTTTTGGCTGT AACGTACCTTCTATCATGGCAACGCGTACTCTTGACCAAGAGCGCGAACGTAAACTCGCCGCATCAATGGCACCGTTTAT GTCATGTGGTGCTCGTCTACCTGTATACGCACTGTTTGCTGCTGCATTCTTTCCTGGTGCTGGACAAAACGTTGTGTTCG CTCTGTACATCATGGGTATTCTGGCTTCTGTATTTACGGGCTTGTTCCTTAAAAATACTACCTATCCTGGTAGCAGCGAT AGCTTGGTTATGGAAATGCCGGATTACGAATTGCCGACCGTGCAAAACGTGATGCTGAAAACTTGGCAGAAGCTGAAACG TTTCGTGCTTGGCGCAGGTAAAACCATTGTAATGGTTGTGGCAATTCTGAGTTTCTTGAATTCATTAGGTATGGACGGCA GTTTTGGTAACGAAGACAGTGAAAGTTCTGTGCTATCTAAAGCGGCTCAAGTTGTAACTCCAGTGTTCCAACCGATTGGT ATTACTGAAGAGAACTGGCCTGCAACGGTTGGTATCATTACCGGTATTTTTGCGAAAGAAGCCGTGGTTGGTACGCTAAA TAGCTTATACACTACACCTTCTGATGAAGAAGCGGCTGAGTTTGATCTAGCGGCAAGTTTAGAAGAAGCCGTAATGACCA TTCCTGAAAACCTTGCTGGTTTGAGCTATTCCGATCCATTAGGCATTGAAGTTGGTGACTTGTCTGACTCTAGTTCTGTG GCTGCTGATCAAGAGGTTGATACTTCGATCTTTGGTAACTTGAAAGATAAGTTTGTATCAGGCCACGCTGCGTTTGCTTA CTTAATCCTAATCTTGCTTTACACACCTTGTGTGGCAGCGATGGGTGCTTATGTTCGTGAATTTGGTCAGACGTTTGCCC GCTTCATCGCAGTTTGGACAATGGCACTTGGTTACTTCGGTGCGACCTTCTATTACCAAGCAGCAAACTTCGCTGTACAC CCAGTAAGTAGTGCTGTGTGGATGGTGGCAATAGCTGGTGGTTTTGTGATGACGTATCGCATCTTCAAGAAAATCGGCAG TAAGCAAAAAGCACTTGAGGTGCAAGTAGTATGA
Upstream 100 bases:
>100_bases TATCCGTCGTGCACCTATGGGTGATCCGCTTCAAGTTGAAGTGAGAGGTGTTTCTATAGCCATTCGTGAAAGCATTGCAG AACAAATCGAGGTTATCTAA
Downstream 100 bases:
>100_bases TTTTAACTGAACTTCATCAATACATTGATAACGAAGGTGTTGCTGCTCGTAGTGAGCTTGCATCTAAGTTTGGGGTAAGT GAAGACGGTATCGATGCTAT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MDYQVLTVGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGLYSHAGDQFQLTDLPGIYALDSGNDANSIDESIASRAV LTHPADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRERQVINLKALEKELGCPVLSLSANDKGQVVRFKE RLHKLLVQGVSLDPISIDYDVALEALIPSVESQFDDADVSHRALAIRALENDYLVLNGLAPQTRTQIDSVRLGADFDIDL AVADAKYTFLHELCKRVRRSEGKLSRNFTEKADQFILNKWVGIPFFFVIMYLMFMFSINIGSAFIDFFDIGVGAILVDGG HHLLDGHLPVWLVTVLADGIGGGIQTVATFIPVIAALYLFLAVLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGC NVPSIMATRTLDQERERKLAASMAPFMSCGARLPVYALFAAAFFPGAGQNVVFALYIMGILASVFTGLFLKNTTYPGSSD SLVMEMPDYELPTVQNVMLKTWQKLKRFVLGAGKTIVMVVAILSFLNSLGMDGSFGNEDSESSVLSKAAQVVTPVFQPIG ITEENWPATVGIITGIFAKEAVVGTLNSLYTTPSDEEAAEFDLAASLEEAVMTIPENLAGLSYSDPLGIEVGDLSDSSSV AADQEVDTSIFGNLKDKFVSGHAAFAYLILILLYTPCVAAMGAYVREFGQTFARFIAVWTMALGYFGATFYYQAANFAVH PVSSAVWMVAIAGGFVMTYRIFKKIGSKQKALEVQVV
Sequences:
>Translated_757_residues MDYQVLTVGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGLYSHAGDQFQLTDLPGIYALDSGNDANSIDESIASRAV LTHPADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRERQVINLKALEKELGCPVLSLSANDKGQVVRFKE RLHKLLVQGVSLDPISIDYDVALEALIPSVESQFDDADVSHRALAIRALENDYLVLNGLAPQTRTQIDSVRLGADFDIDL AVADAKYTFLHELCKRVRRSEGKLSRNFTEKADQFILNKWVGIPFFFVIMYLMFMFSINIGSAFIDFFDIGVGAILVDGG HHLLDGHLPVWLVTVLADGIGGGIQTVATFIPVIAALYLFLAVLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGC NVPSIMATRTLDQERERKLAASMAPFMSCGARLPVYALFAAAFFPGAGQNVVFALYIMGILASVFTGLFLKNTTYPGSSD SLVMEMPDYELPTVQNVMLKTWQKLKRFVLGAGKTIVMVVAILSFLNSLGMDGSFGNEDSESSVLSKAAQVVTPVFQPIG ITEENWPATVGIITGIFAKEAVVGTLNSLYTTPSDEEAAEFDLAASLEEAVMTIPENLAGLSYSDPLGIEVGDLSDSSSV AADQEVDTSIFGNLKDKFVSGHAAFAYLILILLYTPCVAAMGAYVREFGQTFARFIAVWTMALGYFGATFYYQAANFAVH PVSSAVWMVAIAGGFVMTYRIFKKIGSKQKALEVQVV >Mature_757_residues MDYQVLTVGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGLYSHAGDQFQLTDLPGIYALDSGNDANSIDESIASRAV LTHPADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNKMDVLKRERQVINLKALEKELGCPVLSLSANDKGQVVRFKE RLHKLLVQGVSLDPISIDYDVALEALIPSVESQFDDADVSHRALAIRALENDYLVLNGLAPQTRTQIDSVRLGADFDIDL AVADAKYTFLHELCKRVRRSEGKLSRNFTEKADQFILNKWVGIPFFFVIMYLMFMFSINIGSAFIDFFDIGVGAILVDGG HHLLDGHLPVWLVTVLADGIGGGIQTVATFIPVIAALYLFLAVLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGC NVPSIMATRTLDQERERKLAASMAPFMSCGARLPVYALFAAAFFPGAGQNVVFALYIMGILASVFTGLFLKNTTYPGSSD SLVMEMPDYELPTVQNVMLKTWQKLKRFVLGAGKTIVMVVAILSFLNSLGMDGSFGNEDSESSVLSKAAQVVTPVFQPIG ITEENWPATVGIITGIFAKEAVVGTLNSLYTTPSDEEAAEFDLAASLEEAVMTIPENLAGLSYSDPLGIEVGDLSDSSSV AADQEVDTSIFGNLKDKFVSGHAAFAYLILILLYTPCVAAMGAYVREFGQTFARFIAVWTMALGYFGATFYYQAANFAVH PVSSAVWMVAIAGGFVMTYRIFKKIGSKQKALEVQVV
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=742, Percent_Identity=44.4743935309973, Blast_Score=552, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 82229; Mature: 82229
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQVLTVGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGLYSHAGDQFQLTDLPGIY CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCEE ALDSGNDANSIDESIASRAVLTHPADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNK EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH MDVLKRERQVINLKALEKELGCPVLSLSANDKGQVVRFKERLHKLLVQGVSLDPISIDYD HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH VALEALIPSVESQFDDADVSHRALAIRALENDYLVLNGLAPQTRTQIDSVRLGADFDIDL HHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCEEEEECCCCHHHHHHHHEEECCCCCEEE AVADAKYTFLHELCKRVRRSEGKLSRNFTEKADQFILNKWVGIPFFFVIMYLMFMFSINI EEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GSAFIDFFDIGVGAILVDGGHHLLDGHLPVWLVTVLADGIGGGIQTVATFIPVIAALYLF HHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAVLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGCNVPSIMATRTLDQERERKLA HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ASMAPFMSCGARLPVYALFAAAFFPGAGQNVVFALYIMGILASVFTGLFLKNTTYPGSSD HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SLVMEMPDYELPTVQNVMLKTWQKLKRFVLGAGKTIVMVVAILSFLNSLGMDGSFGNEDS CEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH ESSVLSKAAQVVTPVFQPIGITEENWPATVGIITGIFAKEAVVGTLNSLYTTPSDEEAAE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FDLAASLEEAVMTIPENLAGLSYSDPLGIEVGDLSDSSSVAADQEVDTSIFGNLKDKFVS HHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHC GHAAFAYLILILLYTPCVAAMGAYVREFGQTFARFIAVWTMALGYFGATFYYQAANFAVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEC PVSSAVWMVAIAGGFVMTYRIFKKIGSKQKALEVQVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MDYQVLTVGNPNSGKTTLFNALTGAKQHVGNWVGVTVEKKTGLYSHAGDQFQLTDLPGIY CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCEE ALDSGNDANSIDESIASRAVLTHPADVIINVVDASCLERSLYMTLQLRELGRPMIVVLNK EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH MDVLKRERQVINLKALEKELGCPVLSLSANDKGQVVRFKERLHKLLVQGVSLDPISIDYD HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH VALEALIPSVESQFDDADVSHRALAIRALENDYLVLNGLAPQTRTQIDSVRLGADFDIDL HHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCEEEEECCCCHHHHHHHHEEECCCCCEEE AVADAKYTFLHELCKRVRRSEGKLSRNFTEKADQFILNKWVGIPFFFVIMYLMFMFSINI EEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GSAFIDFFDIGVGAILVDGGHHLLDGHLPVWLVTVLADGIGGGIQTVATFIPVIAALYLF HHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAVLESSGYMARAAFVLDKVMQKIGLPGKAFVPLVLGFGCNVPSIMATRTLDQERERKLA HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ASMAPFMSCGARLPVYALFAAAFFPGAGQNVVFALYIMGILASVFTGLFLKNTTYPGSSD HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SLVMEMPDYELPTVQNVMLKTWQKLKRFVLGAGKTIVMVVAILSFLNSLGMDGSFGNEDS CEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH ESSVLSKAAQVVTPVFQPIGITEENWPATVGIITGIFAKEAVVGTLNSLYTTPSDEEAAE HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FDLAASLEEAVMTIPENLAGLSYSDPLGIEVGDLSDSSSVAADQEVDTSIFGNLKDKFVS HHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHC GHAAFAYLILILLYTPCVAAMGAYVREFGQTFARFIAVWTMALGYFGATFYYQAANFAVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEC PVSSAVWMVAIAGGFVMTYRIFKKIGSKQKALEVQVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA