| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710199
Identifier: 218710199
GI number: 218710199
Start: 2396453
End: 2396881
Strand: Direct
Name: 218710199
Synonym: VS_2231
Alternate gene names: NA
Gene position: 2396453-2396881 (Clockwise)
Preceding gene: 218710198
Following gene: 218710206
Centisome position: 72.64
GC content: 46.39
Gene sequence:
>429_bases ATGAGCTTTGAACTTCACCCACAGTTAGCAAAAGACACCACGCTTATTGGCGAATTTCCACTAAGCTTGGCGCTGCTAAG CAAAGACAGTGCAGTGCCTTGGGTTATCTTGGTACCCAAACGCGCCAACCTAAAAGAGTTGCACCATCTACCAATGAAAG AACAACAGCAGTTCTTGCTTGAGTCTCAAGCGGTAAGCCAAGCATTAGAAGCGACATTCCAACCAGACAAATTAAACCTA GGCGCGCTGGGTAACATGGTGCCACAGCTACACATTCACCATATTGCGCGTTTCAAAAATGACATCGCATGGCCAGGTCC AGTATGGGGCAACACTAAAGGCGAGCAACGCAGTGAAGAAGAACAGACAGCAATCCATACTCGTATCCAAAACGTTTTGT CGCTGAGTTCTATCTTCAAGAAAGCATAA
Upstream 100 bases:
>100_bases AAAGAATCTGCCTTGTTCTCAAACCTTTTTCCTGCGCTATTTCTGATCATTTACTTACTGTGATTGGTATGACTTCAAGA AATCGAAATGGATAATAATA
Downstream 100 bases:
>100_bases TTCGAGTACATCTCATTACGCTTTAAAAGAAGACTGTTCAGAAAAGACACATAACAAAAAGCCGCTCACCTAAAATAGGT GAGCGGCTTTTTTATTGTCT
Product: HIT family hydrolase
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Family Protein; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSFELHPQLAKDTTLIGEFPLSLALLSKDSAVPWVILVPKRANLKELHHLPMKEQQQFLLESQAVSQALEATFQPDKLNL GALGNMVPQLHIHHIARFKNDIAWPGPVWGNTKGEQRSEEEQTAIHTRIQNVLSLSSIFKKA
Sequences:
>Translated_142_residues MSFELHPQLAKDTTLIGEFPLSLALLSKDSAVPWVILVPKRANLKELHHLPMKEQQQFLLESQAVSQALEATFQPDKLNL GALGNMVPQLHIHHIARFKNDIAWPGPVWGNTKGEQRSEEEQTAIHTRIQNVLSLSSIFKKA >Mature_141_residues SFELHPQLAKDTTLIGEFPLSLALLSKDSAVPWVILVPKRANLKELHHLPMKEQQQFLLESQAVSQALEATFQPDKLNLG ALGNMVPQLHIHHIARFKNDIAWPGPVWGNTKGEQRSEEEQTAIHTRIQNVLSLSSIFKKA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15975; Mature: 15843
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFELHPQLAKDTTLIGEFPLSLALLSKDSAVPWVILVPKRANLKELHHLPMKEQQQFLL CCCCCCCCCCCCCEEECCCCHHHEEECCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHH ESQAVSQALEATFQPDKLNLGALGNMVPQLHIHHIARFKNDIAWPGPVWGNTKGEQRSEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH EQTAIHTRIQNVLSLSSIFKKA HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFELHPQLAKDTTLIGEFPLSLALLSKDSAVPWVILVPKRANLKELHHLPMKEQQQFLL CCCCCCCCCCCCEEECCCCHHHEEECCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHH ESQAVSQALEATFQPDKLNLGALGNMVPQLHIHHIARFKNDIAWPGPVWGNTKGEQRSEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH EQTAIHTRIQNVLSLSSIFKKA HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA