| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710195
Identifier: 218710195
GI number: 218710195
Start: 2391873
End: 2392106
Strand: Reverse
Name: 218710195
Synonym: VS_2227
Alternate gene names: NA
Gene position: 2392106-2391873 (Counterclockwise)
Preceding gene: 218710197
Following gene: 218710194
Centisome position: 72.5
GC content: 41.03
Gene sequence:
>234_bases TTGACGCTTTGGCCAAAAATAGAGGTGATACTTATGGATAAAGAGTTACTAGCAAAAAAACTGTACTGCAAACGAGTGAA TTCATTAGCGGGAAGTACAGAGTTAGATGGTAATGTTCTAGATGAAATGTGGGAAAGTAAAACCTCACCAACCGATGCAG TGAAAGCCATGCAGCCTTGCGATAATCATTTTGAAGGTGCCCCTTGGTTGTCGCGTTATCTCAGCCGAAAATAA
Upstream 100 bases:
>100_bases TTGTTTTATATAGAAATATCAGTTTTTCGATAGAAAAAAAGGCAGAAGCTTCATTTTTCAAGTTTTGACCGTAGTACGCA TTTGAACTTCAACCGAGGCA
Downstream 100 bases:
>100_bases TAACGATTCTTTGATTTTTATTTCTTCAATTCTTACCTTCTAGGTAGCTTAACCCGAACCAAACACCTCCGGTGCGAAGT CATTCTTGATTCGCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTLWPKIEVILMDKELLAKKLYCKRVNSLAGSTELDGNVLDEMWESKTSPTDAVKAMQPCDNHFEGAPWLSRYLSRK
Sequences:
>Translated_77_residues MTLWPKIEVILMDKELLAKKLYCKRVNSLAGSTELDGNVLDEMWESKTSPTDAVKAMQPCDNHFEGAPWLSRYLSRK >Mature_76_residues TLWPKIEVILMDKELLAKKLYCKRVNSLAGSTELDGNVLDEMWESKTSPTDAVKAMQPCDNHFEGAPWLSRYLSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8829; Mature: 8698
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLWPKIEVILMDKELLAKKLYCKRVNSLAGSTELDGNVLDEMWESKTSPTDAVKAMQPC CCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCC DNHFEGAPWLSRYLSRK CCCCCCCHHHHHHHCCC >Mature Secondary Structure TLWPKIEVILMDKELLAKKLYCKRVNSLAGSTELDGNVLDEMWESKTSPTDAVKAMQPC CCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCC DNHFEGAPWLSRYLSRK CCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA