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The map label for this gene is 218710184

Identifier: 218710184

GI number: 218710184

Start: 2374357

End: 2376390

Strand: Direct

Name: 218710184

Synonym: VS_2216

Alternate gene names: NA

Gene position: 2374357-2376390 (Clockwise)

Preceding gene: 218710183

Following gene: 218710185

Centisome position: 71.97

GC content: 47.05

Gene sequence:

>2034_bases
GTGACTGTTCCTGCTAATAAAGCGATGCCATTGCGCATCGCTCTTTTAGCTCAGCCAGCAAACGCGGCTGAGCTTTCTGC
CGACTTATTCCCCTCGTTCCCTGAAATGGTTTCTGTTGTGGTTGATGGCAATTTTAATCAAGCACTTACTCAAGCAATTG
AGGCAGTCAATCAAGGTAATGTCGTTAAGCTTGGTTTGGATTCTCACTCACCATCATTGTTGATGTTGAGTGCACTGAAT
GCAGCTCAGAATAAAATTCACCCACACGCGAATTTGGCGAGCTTTGTAGATACAGCTACCGGAAATAGTATTCAGCTAGC
TCTGGATATTGCACGCCGCCCCGCTGCAAATTTAAGCCATCAACAGCAATACTCAACCTTATCTGCTTCACAGCAGTTTG
ATGAATTGTTGAATATAGTTGAGGCTATATCGAGCCGTTCATTACCGAGTCATTATTGGTTCACTGAGCCGAACAAAGCC
CGTGTTGCTTCATTGACCTTCAATGACGATAGCCAAAAATCCACCAGCCTGATATTGACTCAAGCGACCGGTTTGCAAGA
GCCAAAACCATTACTATCCAGCGAACGTTTGATGTTTGTGGTTTCTGGCAATGACCAAGCTGAATTGGTTTCTCAGCTAA
CCTCGTTAAGAGAAGAGCTTGAATACGTTAACGAATCGACAGACCGTGAACTCGCTATCGCCAGCTTGATGTATTCAAAC
CTAAGCCATTTCCAAAGCGCTCAACACAATATTGGCCTTGGTACGAATATCGTGATTCAGGCGGCTTCAATTGATGCTGC
ACTACAAGAGATCACAGCGCTAGAAAATGCGTTGCCAAAAGTAATGGCTGACAATAGCCACTACAAAACGCCAGCAGGCA
GTTGTTTCTCACCGAAGCCTCAAAGTAAAGGTGGCGTTGCATTTGTTTACCCTGGTGTTGGCACGGTTTATCCCGGTATG
TTGCGCGAATTTCACCACCATTTCCCACAGTTATTTGCTCGTTTAGAACGTGAAGGTAACTTGAAAGAGATGCTGCAGGC
TGACAAAACCTACGCTGAAGATTCGCAAGAAATGTCGCTCAGTGAATTGGCAATTGCAGGCGTCGGCAGTAGTTATCTGT
TAACACAACTGCTATGTGATGAATTCAAAGTGCAGCCAGACTTCGCCTTGGGTTACTCCAAGGGTGAAGCTTCCATGTGG
GCCAGCTTAAATGTTTGGAAAAACCCACATGCGCTGATTGAGATGACTCAAACCAGTCCTATCTTCACCACGGCTATTTC
TGGTGAACTGACAGCGGTACGTCAAGATTGGCAGCTAAACAGCGACGAAAGCATCCAATGGAATAGCTTTGTGGTTCGCA
GTGATGCACAAGCGATTGAGGCTCTGTTACCAGAATTCCCACGCGCTTATCTCGCTATAATCCAAGGCGACACTTGCGTG
CTAGCAGGTTGTGAAAGCACATGTCGTGCACTACTCAAAAAACTAGGTAAACGTGGCATTGCCGCGAACCGTGTTACTGC
GATGCACACCACACCAGCGTTGAGCCAGCATAGCCAAGTGCAGGAGTTTTACACGCAACCACTGTTCGACGAGTTGCCAA
AGCATATCCGCTTTATCAGCGCAGCAGGTCTACCGACTGGCGCACCAATCAATATCGACAGTGACAGCATCGCCCTTTCG
ATTGCCGACACTTTCTGTTCAACGCTGGATTTCACCGCGTTGATCCAGAGTGCGCGTCAACAAGGTGCTCGTCTGTTTGT
AGAAGTAGGTGCCGATCGTCAAACCAGCACATTGATCGACAAGATCAATCGTAGCGACAACGTAGCAGACCAGTACTGCA
CAATCGCTTCCAATGCCAAAGGCGGTGACGATGTTGTCACGCTCATCAAATGCATTGGTCAGCTCATTACTCATCAAATT
CCACTGTCTGTCGAGCCACTTATTCAAGGGCTAAAACAACAGATCACCACCGCTAAGCAATTAAGTGGTGTGTCTCAAGG
CAGCGCAGTGAATCATCAAGGAGAGCTAGTATGA

Upstream 100 bases:

>100_bases
CTATCAGCAAGAGCTTAAATGACGCATTTTTACCGAAATCTAGCTCAGCAGTGTCGAAGAAAGAGGCGACTAAGAACCCA
GAAAAGGAGCAATTGTCATA

Downstream 100 bases:

>100_bases
GTTCTCAATCGAACCAGTATCGGGCTCAGAACAAACAACAAGTAAAGTGCAATAAGATCGCGATTGTTGGTATTGCAAAC
CAATACCCAGAAGCTGATAC

Product: omega-3 polyunsaturated fatty acid synthase PfaB

Products: NA

Alternate protein names: PfaB Family Protein; Beta-Ketoacyl Synthase; Polyketide Synthase; Polyunsaturated Fatty Acid Synthase PfaB; Beta-Ketoacyl Synthase HglC; LOW QUALITY PROTEIN Polyketide Synthase; LOW QUALITY PROTEIN Beta-Ketoacyl Synthase; Heterocyst Glycolipid Synthase; Glycolipid Synthase; Short-Chain Dehydrogenase/Reductase; Multi-Domain Beta-Ketoacyl Polyketide Synthase; Beta Keto-Acyl Synthase

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MTVPANKAMPLRIALLAQPANAAELSADLFPSFPEMVSVVVDGNFNQALTQAIEAVNQGNVVKLGLDSHSPSLLMLSALN
AAQNKIHPHANLASFVDTATGNSIQLALDIARRPAANLSHQQQYSTLSASQQFDELLNIVEAISSRSLPSHYWFTEPNKA
RVASLTFNDDSQKSTSLILTQATGLQEPKPLLSSERLMFVVSGNDQAELVSQLTSLREELEYVNESTDRELAIASLMYSN
LSHFQSAQHNIGLGTNIVIQAASIDAALQEITALENALPKVMADNSHYKTPAGSCFSPKPQSKGGVAFVYPGVGTVYPGM
LREFHHHFPQLFARLEREGNLKEMLQADKTYAEDSQEMSLSELAIAGVGSSYLLTQLLCDEFKVQPDFALGYSKGEASMW
ASLNVWKNPHALIEMTQTSPIFTTAISGELTAVRQDWQLNSDESIQWNSFVVRSDAQAIEALLPEFPRAYLAIIQGDTCV
LAGCESTCRALLKKLGKRGIAANRVTAMHTTPALSQHSQVQEFYTQPLFDELPKHIRFISAAGLPTGAPINIDSDSIALS
IADTFCSTLDFTALIQSARQQGARLFVEVGADRQTSTLIDKINRSDNVADQYCTIASNAKGGDDVVTLIKCIGQLITHQI
PLSVEPLIQGLKQQITTAKQLSGVSQGSAVNHQGELV

Sequences:

>Translated_677_residues
MTVPANKAMPLRIALLAQPANAAELSADLFPSFPEMVSVVVDGNFNQALTQAIEAVNQGNVVKLGLDSHSPSLLMLSALN
AAQNKIHPHANLASFVDTATGNSIQLALDIARRPAANLSHQQQYSTLSASQQFDELLNIVEAISSRSLPSHYWFTEPNKA
RVASLTFNDDSQKSTSLILTQATGLQEPKPLLSSERLMFVVSGNDQAELVSQLTSLREELEYVNESTDRELAIASLMYSN
LSHFQSAQHNIGLGTNIVIQAASIDAALQEITALENALPKVMADNSHYKTPAGSCFSPKPQSKGGVAFVYPGVGTVYPGM
LREFHHHFPQLFARLEREGNLKEMLQADKTYAEDSQEMSLSELAIAGVGSSYLLTQLLCDEFKVQPDFALGYSKGEASMW
ASLNVWKNPHALIEMTQTSPIFTTAISGELTAVRQDWQLNSDESIQWNSFVVRSDAQAIEALLPEFPRAYLAIIQGDTCV
LAGCESTCRALLKKLGKRGIAANRVTAMHTTPALSQHSQVQEFYTQPLFDELPKHIRFISAAGLPTGAPINIDSDSIALS
IADTFCSTLDFTALIQSARQQGARLFVEVGADRQTSTLIDKINRSDNVADQYCTIASNAKGGDDVVTLIKCIGQLITHQI
PLSVEPLIQGLKQQITTAKQLSGVSQGSAVNHQGELV
>Mature_676_residues
TVPANKAMPLRIALLAQPANAAELSADLFPSFPEMVSVVVDGNFNQALTQAIEAVNQGNVVKLGLDSHSPSLLMLSALNA
AQNKIHPHANLASFVDTATGNSIQLALDIARRPAANLSHQQQYSTLSASQQFDELLNIVEAISSRSLPSHYWFTEPNKAR
VASLTFNDDSQKSTSLILTQATGLQEPKPLLSSERLMFVVSGNDQAELVSQLTSLREELEYVNESTDRELAIASLMYSNL
SHFQSAQHNIGLGTNIVIQAASIDAALQEITALENALPKVMADNSHYKTPAGSCFSPKPQSKGGVAFVYPGVGTVYPGML
REFHHHFPQLFARLEREGNLKEMLQADKTYAEDSQEMSLSELAIAGVGSSYLLTQLLCDEFKVQPDFALGYSKGEASMWA
SLNVWKNPHALIEMTQTSPIFTTAISGELTAVRQDWQLNSDESIQWNSFVVRSDAQAIEALLPEFPRAYLAIIQGDTCVL
AGCESTCRALLKKLGKRGIAANRVTAMHTTPALSQHSQVQEFYTQPLFDELPKHIRFISAAGLPTGAPINIDSDSIALSI
ADTFCSTLDFTALIQSARQQGARLFVEVGADRQTSTLIDKINRSDNVADQYCTIASNAKGGDDVVTLIKCIGQLITHQIP
LSVEPLIQGLKQQITTAKQLSGVSQGSAVNHQGELV

Specific function: Unknown

COG id: COG3321

COG function: function code Q; Polyketide synthase modules and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73393; Mature: 73262

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPANKAMPLRIALLAQPANAAELSADLFPSFPEMVSVVVDGNFNQALTQAIEAVNQGN
CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCCCC
VVKLGLDSHSPSLLMLSALNAAQNKIHPHANLASFVDTATGNSIQLALDIARRPAANLSH
EEEEECCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEHHCCCCCCCH
QQQYSTLSASQQFDELLNIVEAISSRSLPSHYWFTEPNKARVASLTFNDDSQKSTSLILT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
QATGLQEPKPLLSSERLMFVVSGNDQAELVSQLTSLREELEYVNESTDRELAIASLMYSN
ECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LSHFQSAQHNIGLGTNIVIQAASIDAALQEITALENALPKVMADNSHYKTPAGSCFSPKP
HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QSKGGVAFVYPGVGTVYPGMLREFHHHFPQLFARLEREGNLKEMLQADKTYAEDSQEMSL
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
SELAIAGVGSSYLLTQLLCDEFKVQPDFALGYSKGEASMWASLNVWKNPHALIEMTQTSP
HHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCEEEEEECCCC
IFTTAISGELTAVRQDWQLNSDESIQWNSFVVRSDAQAIEALLPEFPRAYLAIIQGDTCV
EEEEECCCCHHEEHHCCCCCCCCCEEECCEEEECHHHHHHHHHHHCCHHHEEEEECCEEE
LAGCESTCRALLKKLGKRGIAANRVTAMHTTPALSQHSQVQEFYTQPLFDELPKHIRFIS
EECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
AAGLPTGAPINIDSDSIALSIADTFCSTLDFTALIQSARQQGARLFVEVGADRQTSTLID
HCCCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
KINRSDNVADQYCTIASNAKGGDDVVTLIKCIGQLITHQIPLSVEPLIQGLKQQITTAKQ
HHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LSGVSQGSAVNHQGELV
HCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVPANKAMPLRIALLAQPANAAELSADLFPSFPEMVSVVVDGNFNQALTQAIEAVNQGN
CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCCCC
VVKLGLDSHSPSLLMLSALNAAQNKIHPHANLASFVDTATGNSIQLALDIARRPAANLSH
EEEEECCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEHHCCCCCCCH
QQQYSTLSASQQFDELLNIVEAISSRSLPSHYWFTEPNKARVASLTFNDDSQKSTSLILT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
QATGLQEPKPLLSSERLMFVVSGNDQAELVSQLTSLREELEYVNESTDRELAIASLMYSN
ECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LSHFQSAQHNIGLGTNIVIQAASIDAALQEITALENALPKVMADNSHYKTPAGSCFSPKP
HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QSKGGVAFVYPGVGTVYPGMLREFHHHFPQLFARLEREGNLKEMLQADKTYAEDSQEMSL
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
SELAIAGVGSSYLLTQLLCDEFKVQPDFALGYSKGEASMWASLNVWKNPHALIEMTQTSP
HHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCEEEEEECCCC
IFTTAISGELTAVRQDWQLNSDESIQWNSFVVRSDAQAIEALLPEFPRAYLAIIQGDTCV
EEEEECCCCHHEEHHCCCCCCCCCEEECCEEEECHHHHHHHHHHHCCHHHEEEEECCEEE
LAGCESTCRALLKKLGKRGIAANRVTAMHTTPALSQHSQVQEFYTQPLFDELPKHIRFIS
EECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
AAGLPTGAPINIDSDSIALSIADTFCSTLDFTALIQSARQQGARLFVEVGADRQTSTLID
HCCCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
KINRSDNVADQYCTIASNAKGGDDVVTLIKCIGQLITHQIPLSVEPLIQGLKQQITTAKQ
HHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LSGVSQGSAVNHQGELV
HCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA