Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710150

Identifier: 218710150

GI number: 218710150

Start: 2327939

End: 2328862

Strand: Reverse

Name: 218710150

Synonym: VS_2180

Alternate gene names: NA

Gene position: 2328862-2327939 (Counterclockwise)

Preceding gene: 218710154

Following gene: 218710149

Centisome position: 70.59

GC content: 46.75

Gene sequence:

>924_bases
ATGAAACGATTTTTCTCACTAGTCGCGATCCTGTTGGTAACAGTCGCGGTGACGCCAATCGCGGAAGCGAAAAAGTTTGG
TGGTGGTAAGTCATTTGGCAAAAGCTTTAAAACGGCTCCAGCACCAAAACAACAAAACACAAATTCGATCCGACAAGATC
AAACTGGCAAGAAAACAGCAGCAGCTAACTCTAGCAAGAAAGGCCTTATGGGCGGTCTGCTAGGTGGTTTACTTGCTGGT
GGTCTTTTAGCTGCATTCTTTGGTGGCGCATTTGAAGGTATCCAGTTCATGGATATTCTGATCATGGGTCTGATTGCTTT
CCTAGCGTTTAAATTCCTACGCGGAATGTTGGGCGCGAAGCAGGGCTCAATGAATCAGCAGAATGCACGCGGCCAACAGC
CAGCATTCGGCGGCATGGGTCAGAACAAGTTTGAACAACCTAAGCAACAACCAAATGTTCATAACTTCGAGCAAGCACAG
CCTCAATCACAACCTCATTCGCAAAATAGCGCTGGTGGTTTCGGTTTTGGTGCACAAAGCGATGTTCCACATAACTACCC
ACCAGGTTTTGATCAAGCGGCATTCATCAACGGTTCTCGTGAGCACTACCGTACACTGCAAGGTGCATGGAATCACAACG
AGCTAAACACGATTGAAGAATACGTATCTCCAAGCCTATTTGAAGACCTTAAAGCTGAGCGTAACAAGCTAGACGGTGAT
CAGCACACAGACGTAATGTACGTTGATGCTGAAATCGTTCGCGCAGACCACGATGGTAGTAAAGCACAGCTAAGCCTTCA
GTTTAGCGGTCGCTACCGTGACACCGCAGACGGCATTGAAGAAGATATCACTGATATCTGGCACTTAGAGCGTGACCTAA
CGACTCAAAATGCACCTTGGTTAATTGTTGGTATTCAAGGTTAA

Upstream 100 bases:

>100_bases
ATATTATGATACATGTGTAAACGTCGTGAATATTTCATTGTTCTTTGTTAACGAGTATGATTAAGGTGTCGAAAGATAAA
AAAACCTATAAAGGATAATA

Downstream 100 bases:

>100_bases
TTCCACGATTTAACTAAACATCAATATGATGTAGTTATTCGGAATAACGGCAAATAATTCAAAGCCCCTGCTGAGAAATC
AGCAGGGGCTTTTTTGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Import Inner Membrane Translocase Subunit; Tim44 Domain Protein; Tim44-Like Domain-Contain Protein; Tim44-Like Domain Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKRFFSLVAILLVTVAVTPIAEAKKFGGGKSFGKSFKTAPAPKQQNTNSIRQDQTGKKTAAANSSKKGLMGGLLGGLLAG
GLLAAFFGGAFEGIQFMDILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQAQ
PQSQPHSQNSAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTIEEYVSPSLFEDLKAERNKLDGD
QHTDVMYVDAEIVRADHDGSKAQLSLQFSGRYRDTADGIEEDITDIWHLERDLTTQNAPWLIVGIQG

Sequences:

>Translated_307_residues
MKRFFSLVAILLVTVAVTPIAEAKKFGGGKSFGKSFKTAPAPKQQNTNSIRQDQTGKKTAAANSSKKGLMGGLLGGLLAG
GLLAAFFGGAFEGIQFMDILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQAQ
PQSQPHSQNSAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTIEEYVSPSLFEDLKAERNKLDGD
QHTDVMYVDAEIVRADHDGSKAQLSLQFSGRYRDTADGIEEDITDIWHLERDLTTQNAPWLIVGIQG
>Mature_307_residues
MKRFFSLVAILLVTVAVTPIAEAKKFGGGKSFGKSFKTAPAPKQQNTNSIRQDQTGKKTAAANSSKKGLMGGLLGGLLAG
GLLAAFFGGAFEGIQFMDILIMGLIAFLAFKFLRGMLGAKQGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQAQ
PQSQPHSQNSAGGFGFGAQSDVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTIEEYVSPSLFEDLKAERNKLDGD
QHTDVMYVDAEIVRADHDGSKAQLSLQFSGRYRDTADGIEEDITDIWHLERDLTTQNAPWLIVGIQG

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33450; Mature: 33450

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFSLVAILLVTVAVTPIAEAKKFGGGKSFGKSFKTAPAPKQQNTNSIRQDQTGKKTA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHH
AANSSKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIMGLIAFLAFKFLRGMLGAK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQAQPQSQPHSQNSAGGFGFGAQS
CCCCCCHHCCCCCCCCCCCCCCHHHCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
DVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTIEEYVSPSLFEDLKAERNKLDGD
CCCCCCCCCCCCHHEECCCHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCC
QHTDVMYVDAEIVRADHDGSKAQLSLQFSGRYRDTADGIEEDITDIWHLERDLTTQNAPW
CCCCEEEECHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
LIVGIQG
EEEEECC
>Mature Secondary Structure
MKRFFSLVAILLVTVAVTPIAEAKKFGGGKSFGKSFKTAPAPKQQNTNSIRQDQTGKKTA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHH
AANSSKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIMGLIAFLAFKFLRGMLGAK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGSMNQQNARGQQPAFGGMGQNKFEQPKQQPNVHNFEQAQPQSQPHSQNSAGGFGFGAQS
CCCCCCHHCCCCCCCCCCCCCCHHHCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
DVPHNYPPGFDQAAFINGSREHYRTLQGAWNHNELNTIEEYVSPSLFEDLKAERNKLDGD
CCCCCCCCCCCCHHEECCCHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCC
QHTDVMYVDAEIVRADHDGSKAQLSLQFSGRYRDTADGIEEDITDIWHLERDLTTQNAPW
CCCCEEEECHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
LIVGIQG
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA