| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710147
Identifier: 218710147
GI number: 218710147
Start: 2321013
End: 2321333
Strand: Reverse
Name: 218710147
Synonym: VS_2170
Alternate gene names: NA
Gene position: 2321333-2321013 (Counterclockwise)
Preceding gene: 218710148
Following gene: 218710145
Centisome position: 70.36
GC content: 45.79
Gene sequence:
>321_bases GTGGCTGAATTTAAATACAAAGATCTTTCTCAAGAAGAACAAGACAAGCTGGATGCAGCAACCTTTCGTCGTCTGCTAGC ACACTTAGACAATAATAAGGATGTGCAGAACATCGACCTTATGATCTTGGCGGGCTTCTGCCGTAACTGTTTCAGCAAGT GGTATAAAGCGGAAGCTGAGCAACAAGGCCTAGACTTGGATATCGATGACGCTCGTGAGCGCGTATATGGCATGACTTAC GATGAGTGGAAACAAAATCACCAACCAAAAGCGACACCTGAGCAACTAGCGGCGTTTGAAGCGAAGCAGAAGCCAGAATA A
Upstream 100 bases:
>100_bases AAAAGCCTGCGTTTGCTCCTAGCGAATTGCAGGCTTTTTTTGTATAACACACAGAGCTCAATGAATTAATACAAGAAAAC AAATACCAAAGGAAAGTAAA
Downstream 100 bases:
>100_bases TTTGTTCTCGCTAGAAATTGATGAATAGAACAAACCAAAAAAGAGCCCATCAGGGCTCTTTTTATTTTTGCGTCGGTGTT TGTTCTGTGGTTAAGCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAEFKYKDLSQEEQDKLDAATFRRLLAHLDNNKDVQNIDLMILAGFCRNCFSKWYKAEAEQQGLDLDIDDARERVYGMTY DEWKQNHQPKATPEQLAAFEAKQKPE
Sequences:
>Translated_106_residues MAEFKYKDLSQEEQDKLDAATFRRLLAHLDNNKDVQNIDLMILAGFCRNCFSKWYKAEAEQQGLDLDIDDARERVYGMTY DEWKQNHQPKATPEQLAAFEAKQKPE >Mature_105_residues AEFKYKDLSQEEQDKLDAATFRRLLAHLDNNKDVQNIDLMILAGFCRNCFSKWYKAEAEQQGLDLDIDDARERVYGMTYD EWKQNHQPKATPEQLAAFEAKQKPE
Specific function: Unknown
COG id: COG3492
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12459; Mature: 12328
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFKYKDLSQEEQDKLDAATFRRLLAHLDNNKDVQNIDLMILAGFCRNCFSKWYKAEAE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQGLDLDIDDARERVYGMTYDEWKQNHQPKATPEQLAAFEAKQKPE HCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure AEFKYKDLSQEEQDKLDAATFRRLLAHLDNNKDVQNIDLMILAGFCRNCFSKWYKAEAE CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQGLDLDIDDARERVYGMTYDEWKQNHQPKATPEQLAAFEAKQKPE HCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA