| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710144
Identifier: 218710144
GI number: 218710144
Start: 2318498
End: 2319163
Strand: Reverse
Name: 218710144
Synonym: VS_2167
Alternate gene names: NA
Gene position: 2319163-2318498 (Counterclockwise)
Preceding gene: 218710145
Following gene: 218710142
Centisome position: 70.29
GC content: 43.99
Gene sequence:
>666_bases ATGTTTGCAAAAGTATCTACTGCTATCCAATTGGTACTGGCCGTTGCCATTTTCTATTTGGGTTACACCATCTATTCGTT TACCAATAAAATCGGTGAAATCGTTGATACTTATCCGCAGGTGATCGAGGATTTATCCGGTCTTACCAAAGGGCTAAAAG TAGAAGAGCTATTAGCGTTTGCTGAACATGTTAATGAGCTTGCTCCTCAGGTGTTAGATACCGTTGAAGACGTTAGAAAG ACAGTCGAAAAAGTGAATCAAACCGTTTCATCGGTCGATAATAAAATCCCTGCGATATTAGATGAAGTTAAAAATGTCCG AACGGAAGTCGGGCAGGTAAGAACCGATGTCATCCCGCCCACATTGACTGAATTAAAACGATACCGTGTCGATGTGATGC CACCGATGCTCGCTGAAAGTAAATCTTACCGCCAGCAAACTATCCCCACTGTTGTTGCCGAATCTGAAATGCTACGAGCG GAAGTTCCGGGTATTTTGGCACAAGCGAATTTGCTGGCAGATAAAAGTAAAGAGTTAGCTCAAGGTGCCGCAGAAGGCGC AGTGAAAGGCGTGGTGTTATCGCCATTTAATCTACTGCGAGACGCTGGTGATGGAATTAAAACTCGAGTACAAGGTGAAT TCGAACCCTTGCTAGAGGCTGAATAG
Upstream 100 bases:
>100_bases TTGCCTCTTTAAGCTACACCTAGCTAAAGTTAACTATCGTTTCAGTTTAGATATATTCTCAGTTTAGATCTCGCCTCTGC GATAAAGAAAAGGAATATTC
Downstream 100 bases:
>100_bases AGATTACGGACTGTGACGTGACAGCTTGTCGTTAGCATCATTAAAAAGAGAGGCTAGGTATCAAACCTAGCCTCTCTTTT TGTTTTCTCGTAAATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MFAKVSTAIQLVLAVAIFYLGYTIYSFTNKIGEIVDTYPQVIEDLSGLTKGLKVEELLAFAEHVNELAPQVLDTVEDVRK TVEKVNQTVSSVDNKIPAILDEVKNVRTEVGQVRTDVIPPTLTELKRYRVDVMPPMLAESKSYRQQTIPTVVAESEMLRA EVPGILAQANLLADKSKELAQGAAEGAVKGVVLSPFNLLRDAGDGIKTRVQGEFEPLLEAE
Sequences:
>Translated_221_residues MFAKVSTAIQLVLAVAIFYLGYTIYSFTNKIGEIVDTYPQVIEDLSGLTKGLKVEELLAFAEHVNELAPQVLDTVEDVRK TVEKVNQTVSSVDNKIPAILDEVKNVRTEVGQVRTDVIPPTLTELKRYRVDVMPPMLAESKSYRQQTIPTVVAESEMLRA EVPGILAQANLLADKSKELAQGAAEGAVKGVVLSPFNLLRDAGDGIKTRVQGEFEPLLEAE >Mature_221_residues MFAKVSTAIQLVLAVAIFYLGYTIYSFTNKIGEIVDTYPQVIEDLSGLTKGLKVEELLAFAEHVNELAPQVLDTVEDVRK TVEKVNQTVSSVDNKIPAILDEVKNVRTEVGQVRTDVIPPTLTELKRYRVDVMPPMLAESKSYRQQTIPTVVAESEMLRA EVPGILAQANLLADKSKELAQGAAEGAVKGVVLSPFNLLRDAGDGIKTRVQGEFEPLLEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24211; Mature: 24211
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAKVSTAIQLVLAVAIFYLGYTIYSFTNKIGEIVDTYPQVIEDLSGLTKGLKVEELLAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AEHVNELAPQVLDTVEDVRKTVEKVNQTVSSVDNKIPAILDEVKNVRTEVGQVRTDVIPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLTELKRYRVDVMPPMLAESKSYRQQTIPTVVAESEMLRAEVPGILAQANLLADKSKELA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH QGAAEGAVKGVVLSPFNLLRDAGDGIKTRVQGEFEPLLEAE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHCCCC >Mature Secondary Structure MFAKVSTAIQLVLAVAIFYLGYTIYSFTNKIGEIVDTYPQVIEDLSGLTKGLKVEELLAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AEHVNELAPQVLDTVEDVRKTVEKVNQTVSSVDNKIPAILDEVKNVRTEVGQVRTDVIPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLTELKRYRVDVMPPMLAESKSYRQQTIPTVVAESEMLRAEVPGILAQANLLADKSKELA CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH QGAAEGAVKGVVLSPFNLLRDAGDGIKTRVQGEFEPLLEAE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA