| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710140
Identifier: 218710140
GI number: 218710140
Start: 2315355
End: 2316098
Strand: Reverse
Name: 218710140
Synonym: VS_2163
Alternate gene names: NA
Gene position: 2316098-2315355 (Counterclockwise)
Preceding gene: 218710142
Following gene: 218710137
Centisome position: 70.2
GC content: 47.31
Gene sequence:
>744_bases ATGGTATTTTCAACGTTTCAGTTCTTGATCACCACATTATTAGCGGTTGTTTGCGCGAGAGCAATCAGTTTAAGTGAGGG AGATATCCCAGTACTTGCAATGGTCATTCCTGCATTATGGATTCTACCGCAGGGCGGTATCGCAGGTTTAGCTTTGCTTG CTGCCATGACCACTTACGGTCTAACCCTTCCTTTGCAACCCATCACGCTCTCTGTCAGTGTATGGGTGTTATTCCCACTA TTGATGGTGGTCTTTTCAAAACGCAGCAGTTTGTCGGTCGTGATTATTTCTGGCTTGATCGTCGTAACGCTACAAGTCGG GATCATGGTGACGCAATCCGCAGGAAAGCTTGATGGCGTTCCGTGGGTTACCACGCTGCAAACCTTGTCGATCATCGTGA TTTGGTGGGCGGCAAATCATCTTAAACCAGCCAGTCGACACAGCTGGTGGTCATTAGGCTTAATACTTCCATTATGGATG GCCGATTTACCTTATGCCGCTTTGGTTGCTTTGTGTGTCACGGGTATCATGGCATCGATGGAAACCCTCACTCGCTTGAA GACCTTTCGTTGGAATAAGTTACTGTGTTGGACATTGCCAACAGTCGGTTTTGCGGCTTTGGTGATAACCCCAAGTATCG AAGTGCCTAGTCCCGTTTTTGTGGTGTGGTTATGTTTGTTGGGCACCGCTTGGATGACAGACTACATCCTTCGCACCGAA GATAATGAAGACATCGATATTTAG
Upstream 100 bases:
>100_bases CAAAAAATCTAACGAGGTTATCGAGGCTTTTAACAAGCTAGGGTGACCAGTTAATTACTACGATTGGTATGGTACCACGG ATCGGTAGAAGGAGAGGGCT
Downstream 100 bases:
>100_bases CTCTTCTGTAACCAAACCTTTCAACTGCAGGTAAATGGCGAATTTACCTGCGATTTGCGAATGGGTTGAATAAAGGATAA GCACTTAGAACGTAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MVFSTFQFLITTLLAVVCARAISLSEGDIPVLAMVIPALWILPQGGIAGLALLAAMTTYGLTLPLQPITLSVSVWVLFPL LMVVFSKRSSLSVVIISGLIVVTLQVGIMVTQSAGKLDGVPWVTTLQTLSIIVIWWAANHLKPASRHSWWSLGLILPLWM ADLPYAALVALCVTGIMASMETLTRLKTFRWNKLLCWTLPTVGFAALVITPSIEVPSPVFVVWLCLLGTAWMTDYILRTE DNEDIDI
Sequences:
>Translated_247_residues MVFSTFQFLITTLLAVVCARAISLSEGDIPVLAMVIPALWILPQGGIAGLALLAAMTTYGLTLPLQPITLSVSVWVLFPL LMVVFSKRSSLSVVIISGLIVVTLQVGIMVTQSAGKLDGVPWVTTLQTLSIIVIWWAANHLKPASRHSWWSLGLILPLWM ADLPYAALVALCVTGIMASMETLTRLKTFRWNKLLCWTLPTVGFAALVITPSIEVPSPVFVVWLCLLGTAWMTDYILRTE DNEDIDI >Mature_247_residues MVFSTFQFLITTLLAVVCARAISLSEGDIPVLAMVIPALWILPQGGIAGLALLAAMTTYGLTLPLQPITLSVSVWVLFPL LMVVFSKRSSLSVVIISGLIVVTLQVGIMVTQSAGKLDGVPWVTTLQTLSIIVIWWAANHLKPASRHSWWSLGLILPLWM ADLPYAALVALCVTGIMASMETLTRLKTFRWNKLLCWTLPTVGFAALVITPSIEVPSPVFVVWLCLLGTAWMTDYILRTE DNEDIDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27006; Mature: 27006
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFSTFQFLITTLLAVVCARAISLSEGDIPVLAMVIPALWILPQGGIAGLALLAAMTTYG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC LTLPLQPITLSVSVWVLFPLLMVVFSKRSSLSVVIISGLIVVTLQVGIMVTQSAGKLDGV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCC PWVTTLQTLSIIVIWWAANHLKPASRHSWWSLGLILPLWMADLPYAALVALCVTGIMASM CHHHHHHHHHHHHHEEHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ETLTRLKTFRWNKLLCWTLPTVGFAALVITPSIEVPSPVFVVWLCLLGTAWMTDYILRTE HHHHHHHHHCCCEEEEEECCHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DNEDIDI CCCCCCC >Mature Secondary Structure MVFSTFQFLITTLLAVVCARAISLSEGDIPVLAMVIPALWILPQGGIAGLALLAAMTTYG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC LTLPLQPITLSVSVWVLFPLLMVVFSKRSSLSVVIISGLIVVTLQVGIMVTQSAGKLDGV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCC PWVTTLQTLSIIVIWWAANHLKPASRHSWWSLGLILPLWMADLPYAALVALCVTGIMASM CHHHHHHHHHHHHHEEHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ETLTRLKTFRWNKLLCWTLPTVGFAALVITPSIEVPSPVFVVWLCLLGTAWMTDYILRTE HHHHHHHHHCCCEEEEEECCHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DNEDIDI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA