| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710139
Identifier: 218710139
GI number: 218710139
Start: 2314151
End: 2314882
Strand: Direct
Name: 218710139
Synonym: VS_2161
Alternate gene names: NA
Gene position: 2314151-2314882 (Clockwise)
Preceding gene: 218710138
Following gene: 218710141
Centisome position: 70.14
GC content: 38.93
Gene sequence:
>732_bases ATGGAAAATAGCGTTCGTAAACTTCATTCAGAGCAAACAACATCTTTTGACACTGAATACATTGATCAGAAAATGTTTGA AATATTAGTCAAACAGTTAGATATGCTTTACCCAACACGCCAATCATTCCACTTGTTGGACATAGGCGGAGGAAATGGGG TCTATGCTGACAAGATATTGTCTCATTACACTAACTCAAGAGTCACCTTGGTCGAACCCGAAGAAACACTATTGGAGAAA AATCGCGGTCACCCTAACAAAGAGCTGAAATGCTCATTGTTTCAAGATCTTGAATTAGTTATTCCCTACGACATCATTCA ATTTAACTGGGTACTGCACCACTTCATAAGTGACTCATATGAAGCCACCAAGAATATTCAGCAACAAGCTTTAATAAAAG CGTTCAATCACTTGTCATCAGATGGACTTGTAGTGATATTCGAAAACTTTTATGAAGGGATCTTAGTCCGTAACTTGCCG AGCAAATTGATTTACCACACGACCGCTTCAAAAGCACTAGCTCCAATAACCAGTAAGCTGGGTGCCAATACGGCTGGTGT TGGGGTTTGCTTTAATAGTCGAGAGACTTGGCATGATATGCTTTTGGAAGCGGGCTTTAAGGTAATTGTTCATATACCTT TCTATTCTTTCGGAAATCTAAGTCAAGTAAAGACAAGGCTATTGCACCTTAAAGATCAGAATGTGGGTTTATTGATAGCA AAAAAAGAGTGA
Upstream 100 bases:
>100_bases AACACTTCACTCCAATCTTGGCAGTAAGAAAAACCTTATATTTCAATCATAACGTCGTGGCTCGAAAAATGCTTCGTATC TAATTGAATAAGGAGCATCT
Downstream 100 bases:
>100_bases CCCCTATACTAATCAGATCACCACAAAAGGGAAGTCCTTGAACCTGAGATTGGAGGAGCTAACAAGATGAAAGAGAATGA TATGTCGCGAACACATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MENSVRKLHSEQTTSFDTEYIDQKMFEILVKQLDMLYPTRQSFHLLDIGGGNGVYADKILSHYTNSRVTLVEPEETLLEK NRGHPNKELKCSLFQDLELVIPYDIIQFNWVLHHFISDSYEATKNIQQQALIKAFNHLSSDGLVVIFENFYEGILVRNLP SKLIYHTTASKALAPITSKLGANTAGVGVCFNSRETWHDMLLEAGFKVIVHIPFYSFGNLSQVKTRLLHLKDQNVGLLIA KKE
Sequences:
>Translated_243_residues MENSVRKLHSEQTTSFDTEYIDQKMFEILVKQLDMLYPTRQSFHLLDIGGGNGVYADKILSHYTNSRVTLVEPEETLLEK NRGHPNKELKCSLFQDLELVIPYDIIQFNWVLHHFISDSYEATKNIQQQALIKAFNHLSSDGLVVIFENFYEGILVRNLP SKLIYHTTASKALAPITSKLGANTAGVGVCFNSRETWHDMLLEAGFKVIVHIPFYSFGNLSQVKTRLLHLKDQNVGLLIA KKE >Mature_243_residues MENSVRKLHSEQTTSFDTEYIDQKMFEILVKQLDMLYPTRQSFHLLDIGGGNGVYADKILSHYTNSRVTLVEPEETLLEK NRGHPNKELKCSLFQDLELVIPYDIIQFNWVLHHFISDSYEATKNIQQQALIKAFNHLSSDGLVVIFENFYEGILVRNLP SKLIYHTTASKALAPITSKLGANTAGVGVCFNSRETWHDMLLEAGFKVIVHIPFYSFGNLSQVKTRLLHLKDQNVGLLIA KKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27740; Mature: 27740
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSVRKLHSEQTTSFDTEYIDQKMFEILVKQLDMLYPTRQSFHLLDIGGGNGVYADKIL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH SHYTNSRVTLVEPEETLLEKNRGHPNKELKCSLFQDLELVIPYDIIQFNWVLHHFISDSY HHHCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCHH EATKNIQQQALIKAFNHLSSDGLVVIFENFYEGILVRNLPSKLIYHTTASKALAPITSKL HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCHHHHHCCCHHHEECCHHHHHHHHHHHHH GANTAGVGVCFNSRETWHDMLLEAGFKVIVHIPFYSFGNLSQVKTRLLHLKDQNVGLLIA CCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEE KKE ECC >Mature Secondary Structure MENSVRKLHSEQTTSFDTEYIDQKMFEILVKQLDMLYPTRQSFHLLDIGGGNGVYADKIL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH SHYTNSRVTLVEPEETLLEKNRGHPNKELKCSLFQDLELVIPYDIIQFNWVLHHFISDSY HHHCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCHH EATKNIQQQALIKAFNHLSSDGLVVIFENFYEGILVRNLPSKLIYHTTASKALAPITSKL HHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCHHHHHCCCHHHEECCHHHHHHHHHHHHH GANTAGVGVCFNSRETWHDMLLEAGFKVIVHIPFYSFGNLSQVKTRLLHLKDQNVGLLIA CCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEE KKE ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA