| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710138
Identifier: 218710138
GI number: 218710138
Start: 2313573
End: 2313911
Strand: Direct
Name: 218710138
Synonym: VS_2160
Alternate gene names: NA
Gene position: 2313573-2313911 (Clockwise)
Preceding gene: 218710134
Following gene: 218710139
Centisome position: 70.12
GC content: 43.95
Gene sequence:
>339_bases ATGAAAAATACGCTAATCCTTTTCTTTTTCCTGAGTCTAACAGGGTGCACTCATAACCAATCAAAAGCACTGAGCATGAA CTCCTCGCCAGTCAATACGTATCCTCAATCCATGTCGAACCTGCAACTGTGCGACACCTTGTATTACGGGCGATCAAGCA ACCAGACACTCGCAGCAATTGGCAGTGAATTTAATCGAAGAGGTTTATCCAAGAGTTGGTGCGATACCGAAACCAATAAG CTTTATCTAACAAAGACGATTGATTGGGTTGCTGACCAAGTAGAAGACAAAGAAGATTCGGAGGAAGAAGCGTCTGCCGT TGTGTTGCCTGCGAATTAA
Upstream 100 bases:
>100_bases GAAAGTCTTGGTCTATAACTAGTTGGCGAAAAATTGACAAATTAGTGAGGACATCATGGCAATACTGTCTTCAAATCATC GGCAACAGATCTGATACACC
Downstream 100 bases:
>100_bases ATGAGGGTAAAAGTTGCGCACTCATTATTGGTCAAAACAAGCGAATATTAAGGGTAAAAACATGAACAAAATAGACTCTG TATACCCTACTTTATCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKNTLILFFFLSLTGCTHNQSKALSMNSSPVNTYPQSMSNLQLCDTLYYGRSSNQTLAAIGSEFNRRGLSKSWCDTETNK LYLTKTIDWVADQVEDKEDSEEEASAVVLPAN
Sequences:
>Translated_112_residues MKNTLILFFFLSLTGCTHNQSKALSMNSSPVNTYPQSMSNLQLCDTLYYGRSSNQTLAAIGSEFNRRGLSKSWCDTETNK LYLTKTIDWVADQVEDKEDSEEEASAVVLPAN >Mature_112_residues MKNTLILFFFLSLTGCTHNQSKALSMNSSPVNTYPQSMSNLQLCDTLYYGRSSNQTLAAIGSEFNRRGLSKSWCDTETNK LYLTKTIDWVADQVEDKEDSEEEASAVVLPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12525; Mature: 12525
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLILFFFLSLTGCTHNQSKALSMNSSPVNTYPQSMSNLQLCDTLYYGRSSNQTLAAI CCCCEEEEEEEHHCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCHHHH GSEFNRRGLSKSWCDTETNKLYLTKTIDWVADQVEDKEDSEEEASAVVLPAN HHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEECC >Mature Secondary Structure MKNTLILFFFLSLTGCTHNQSKALSMNSSPVNTYPQSMSNLQLCDTLYYGRSSNQTLAAI CCCCEEEEEEEHHCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCHHHH GSEFNRRGLSKSWCDTETNKLYLTKTIDWVADQVEDKEDSEEEASAVVLPAN HHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA