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The map label for this gene is ytcJ [H]

Identifier: 218710089

GI number: 218710089

Start: 2264812

End: 2266527

Strand: Direct

Name: ytcJ [H]

Synonym: VS_2110

Alternate gene names: 218710089

Gene position: 2264812-2266527 (Clockwise)

Preceding gene: 218710087

Following gene: 218710091

Centisome position: 68.65

GC content: 47.49

Gene sequence:

>1716_bases
ATGAACAATAAGCTCACTTTGCCACGCACTGCATGGATTGCATTATTCGCTAGCCTAGTCTCTGTGCCATCGGCTTTTTC
TCAAAGCCTAACCGCAGACCAGATCTTTACCAATGCCGACATATATGGGCATCGCGAGTCAGAGTCGATCGTTACCCATA
AAGGCAAGATCATCTTCATCGGTGACCACGCTCAGGCGCAATCTTTTCAAGGTCAGAGTACCGATGTCATCGACTTGGAG
AATGCCTTTGTTTTGCCGGGGTTCATTGATAATCATAACCATGTGTTTGAAGCCGCCTCAGAGCTGGGTGGCAATTGTGA
ACTTGACTCTGAAGCCACACTCGAAGAGCAAATCCCCTACTTAGAAGTCTGTAAGATCAATGCTGATACCGATGGTCGAG
GCTGGCTGATGGGTTATGGCTTTTCTCTTGAGTCGACACTCGACAGCGACTCTGAATACACACCACTTGAGATCATCGAC
AGTATCTTCCCAGATCGCCCCGTGGTGCTTATGGAGCAAACCTCTCACTCTATGTGGGTCAACTCAAAAGCCTTAAAAAT
AGCCGGAATAAGCCAACAATCTCCTAATCCACAAGGTGGCGCTTATTTAAAAGACCAAGACAGCGGCAAGCTCAATGGCA
TCTTATTAGATAACGCTGGCGACCAAATTATGGAGATGGCGTGGAACAGCCAAAGCGAGCTCTTTGAACAAAGCTACCAA
GGGTTAATGTTCGGTCTTGAAGAAGCCGCTGCGCACGGCATTACCACCATCGGTGACGGCCGGATGTACTGGAAACGAGG
CTGGTATGACGTTTGGCTAGAAGCGGAGCAAAACCAAGATTTGACGGCTCGCGTGTCATTACGCCCTTGGGTTTACCCAT
CAATGGCGATACCCTCTCAATTAGAAGTCTTCGAGAAGATGTATTCCGATGATGAAAGCCGTCTGTTGCTCGTTGATCAG
GTAAAAATGTACAGCGATGGCATCTTCATTAACGGTACAGCGAAAACACTCGCGCCCTATTTAGATACCTATCTGCCACA
GTCTCCCAATGGCCTAAACTACATTCCACCAGCACAGATGAAAGAGTGGCTAACCGCGCTCGATAAAATCGGTTTTAGTG
CGCACATTCATGCGATTGGTGATGGTGCCGTTCGTGAATCTCTTGATGCGATAGAAAGCGTGCGTAAACAAGGTTCGCAA
AAGCCTTATACCCTAACCCACATAGAGTTAATCAATGATGAAGACATTCCCCGCTTCAAGCAGCTCAATGTCTCGGCGGA
CTTCCAAGTCGGTTCCGATTACGTAGCCAAACATCAACACCAATGGGCCGAAGCTTTCCTTGGTGCTCGCCGCGCCAAAG
CCATGATGAACTTAGACGCGATACTTAAGACTGATGCCAATATCACCTTGAGCAGTGACTGGAACGTACACGACATCAAC
CCTCTAGTTGGAATCGCAAATAGCTTAATCATGGGTAAAACAGGCCTAACTGATATCTACACAGCTATCGACGCTTACAC
GCTCAATGCAGCAAAGAGCCTTGGTATCGAAGACGTCACGGGGTCTATTGAGGTTGGAAAATCAGCGGACTTCGCGATTC
TCAACAAAGACATCACTACAATATCGGCAAGACAAATAGCCAAGACTCAGGTGTTGATGACAGTGTTAAGAGGGGATGTG
GTTTTCGAAGACGCTGCTTTCAAAGACATAAATTAG

Upstream 100 bases:

>100_bases
GGAGAGCAACTATGGACACTTTATTATTAAAAATCCGCGATATGATTCTTACCACTCGCTTTCTATACTTACTAAACAGT
GGAACATGGAATAAATAACA

Downstream 100 bases:

>100_bases
CAAACCAACGCTCGACACAAAGCCGTTTGCTACCAGTTAATTTGCTATCCGTTAGCTCACTTCCAATTAATTCACTAAAA
AGTATCAGGGGAAATATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MNNKLTLPRTAWIALFASLVSVPSAFSQSLTADQIFTNADIYGHRESESIVTHKGKIIFIGDHAQAQSFQGQSTDVIDLE
NAFVLPGFIDNHNHVFEAASELGGNCELDSEATLEEQIPYLEVCKINADTDGRGWLMGYGFSLESTLDSDSEYTPLEIID
SIFPDRPVVLMEQTSHSMWVNSKALKIAGISQQSPNPQGGAYLKDQDSGKLNGILLDNAGDQIMEMAWNSQSELFEQSYQ
GLMFGLEEAAAHGITTIGDGRMYWKRGWYDVWLEAEQNQDLTARVSLRPWVYPSMAIPSQLEVFEKMYSDDESRLLLVDQ
VKMYSDGIFINGTAKTLAPYLDTYLPQSPNGLNYIPPAQMKEWLTALDKIGFSAHIHAIGDGAVRESLDAIESVRKQGSQ
KPYTLTHIELINDEDIPRFKQLNVSADFQVGSDYVAKHQHQWAEAFLGARRAKAMMNLDAILKTDANITLSSDWNVHDIN
PLVGIANSLIMGKTGLTDIYTAIDAYTLNAAKSLGIEDVTGSIEVGKSADFAILNKDITTISARQIAKTQVLMTVLRGDV
VFEDAAFKDIN

Sequences:

>Translated_571_residues
MNNKLTLPRTAWIALFASLVSVPSAFSQSLTADQIFTNADIYGHRESESIVTHKGKIIFIGDHAQAQSFQGQSTDVIDLE
NAFVLPGFIDNHNHVFEAASELGGNCELDSEATLEEQIPYLEVCKINADTDGRGWLMGYGFSLESTLDSDSEYTPLEIID
SIFPDRPVVLMEQTSHSMWVNSKALKIAGISQQSPNPQGGAYLKDQDSGKLNGILLDNAGDQIMEMAWNSQSELFEQSYQ
GLMFGLEEAAAHGITTIGDGRMYWKRGWYDVWLEAEQNQDLTARVSLRPWVYPSMAIPSQLEVFEKMYSDDESRLLLVDQ
VKMYSDGIFINGTAKTLAPYLDTYLPQSPNGLNYIPPAQMKEWLTALDKIGFSAHIHAIGDGAVRESLDAIESVRKQGSQ
KPYTLTHIELINDEDIPRFKQLNVSADFQVGSDYVAKHQHQWAEAFLGARRAKAMMNLDAILKTDANITLSSDWNVHDIN
PLVGIANSLIMGKTGLTDIYTAIDAYTLNAAKSLGIEDVTGSIEVGKSADFAILNKDITTISARQIAKTQVLMTVLRGDV
VFEDAAFKDIN
>Mature_571_residues
MNNKLTLPRTAWIALFASLVSVPSAFSQSLTADQIFTNADIYGHRESESIVTHKGKIIFIGDHAQAQSFQGQSTDVIDLE
NAFVLPGFIDNHNHVFEAASELGGNCELDSEATLEEQIPYLEVCKINADTDGRGWLMGYGFSLESTLDSDSEYTPLEIID
SIFPDRPVVLMEQTSHSMWVNSKALKIAGISQQSPNPQGGAYLKDQDSGKLNGILLDNAGDQIMEMAWNSQSELFEQSYQ
GLMFGLEEAAAHGITTIGDGRMYWKRGWYDVWLEAEQNQDLTARVSLRPWVYPSMAIPSQLEVFEKMYSDDESRLLLVDQ
VKMYSDGIFINGTAKTLAPYLDTYLPQSPNGLNYIPPAQMKEWLTALDKIGFSAHIHAIGDGAVRESLDAIESVRKQGSQ
KPYTLTHIELINDEDIPRFKQLNVSADFQVGSDYVAKHQHQWAEAFLGARRAKAMMNLDAILKTDANITLSSDWNVHDIN
PLVGIANSLIMGKTGLTDIYTAIDAYTLNAAKSLGIEDVTGSIEVGKSADFAILNKDITTISARQIAKTQVLMTVLRGDV
VFEDAAFKDIN

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 63145; Mature: 63145

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKLTLPRTAWIALFASLVSVPSAFSQSLTADQIFTNADIYGHRESESIVTHKGKIIFI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCEEEEE
GDHAQAQSFQGQSTDVIDLENAFVLPGFIDNHNHVFEAASELGGNCELDSEATLEEQIPY
ECCHHHHCCCCCCCCEEECCCCEEECCEECCCCHHHHHHHHCCCCCCCCCCCCHHHCCCE
LEVCKINADTDGRGWLMGYGFSLESTLDSDSEYTPLEIIDSIFPDRPVVLMEQTSHSMWV
EEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEE
NSKALKIAGISQQSPNPQGGAYLKDQDSGKLNGILLDNAGDQIMEMAWNSQSELFEQSYQ
CCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHH
GLMFGLEEAAAHGITTIGDGRMYWKRGWYDVWLEAEQNQDLTARVSLRPWVYPSMAIPSQ
HHHHHHHHHHHCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCHH
LEVFEKMYSDDESRLLLVDQVKMYSDGIFINGTAKTLAPYLDTYLPQSPNGLNYIPPAQM
HHHHHHHHCCCCCEEEEEEEHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHH
KEWLTALDKIGFSAHIHAIGDGAVRESLDAIESVRKQGSQKPYTLTHIELINDEDIPRFK
HHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHH
QLNVSADFQVGSDYVAKHQHQWAEAFLGARRAKAMMNLDAILKTDANITLSSDWNVHDIN
EECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCEECC
PLVGIANSLIMGKTGLTDIYTAIDAYTLNAAKSLGIEDVTGSIEVGKSADFAILNKDITT
HHHHHHHHHHCCCCCHHHHHHHHHHHEEHHHHHCCCCCCCCCEEECCCCCEEEECCCCCC
ISARQIAKTQVLMTVLRGDVVFEDAAFKDIN
HHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MNNKLTLPRTAWIALFASLVSVPSAFSQSLTADQIFTNADIYGHRESESIVTHKGKIIFI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCEEEEE
GDHAQAQSFQGQSTDVIDLENAFVLPGFIDNHNHVFEAASELGGNCELDSEATLEEQIPY
ECCHHHHCCCCCCCCEEECCCCEEECCEECCCCHHHHHHHHCCCCCCCCCCCCHHHCCCE
LEVCKINADTDGRGWLMGYGFSLESTLDSDSEYTPLEIIDSIFPDRPVVLMEQTSHSMWV
EEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEE
NSKALKIAGISQQSPNPQGGAYLKDQDSGKLNGILLDNAGDQIMEMAWNSQSELFEQSYQ
CCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHH
GLMFGLEEAAAHGITTIGDGRMYWKRGWYDVWLEAEQNQDLTARVSLRPWVYPSMAIPSQ
HHHHHHHHHHHCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCHH
LEVFEKMYSDDESRLLLVDQVKMYSDGIFINGTAKTLAPYLDTYLPQSPNGLNYIPPAQM
HHHHHHHHCCCCCEEEEEEEHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHH
KEWLTALDKIGFSAHIHAIGDGAVRESLDAIESVRKQGSQKPYTLTHIELINDEDIPRFK
HHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHH
QLNVSADFQVGSDYVAKHQHQWAEAFLGARRAKAMMNLDAILKTDANITLSSDWNVHDIN
EECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCEECC
PLVGIANSLIMGKTGLTDIYTAIDAYTLNAAKSLGIEDVTGSIEVGKSADFAILNKDITT
HHHHHHHHHHCCCCCHHHHHHHHHHHEEHHHHHCCCCCCCCCEEECCCCCEEEECCCCCC
ISARQIAKTQVLMTVLRGDVVFEDAAFKDIN
HHHHHHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]