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The map label for this gene is blc [H]

Identifier: 218710088

GI number: 218710088

Start: 2263971

End: 2264489

Strand: Reverse

Name: blc [H]

Synonym: VS_2109

Alternate gene names: 218710088

Gene position: 2264489-2263971 (Counterclockwise)

Preceding gene: 218710090

Following gene: 218710085

Centisome position: 68.64

GC content: 44.89

Gene sequence:

>519_bases
ATGAAAAAAATATTATTGCTGCTTAGTGTGATTCTATTGGGTGGTTGCGTGGGCATGCCTGAAACAGTAAAGCCCGTTCA
ACAGTTTGAATTGGATAGATACTTGGGAAAATGGTACGAAGTGGCTCGTTTAGACCACTCGTTTGAGCGTGGCTTAGATA
ACATCAGTGCCGAATATAGCTTGCGTGATGATGGTGGCGTTAAGGTGATTAACCGCGGCTATTCGGCGGAAGATGGCGAA
TGGAACGAAGCGGAAGGTAAGGCGTACTTTGTCGAAGGCAGCGATCAGGGTTATCTAAAAGTGTCGTTCTTTGGCCCCTT
CTACGGAGCTTATGTGGTGTTTGAGTTGGACAAAGAGAATTACCAATACGCGTTTGTTTCGGGCCCAGATACCGACTACT
TGTGGTTACTTTCAAGAACACCAGAGGTTGCACCAGAAGTGATGGAGAAGTTCAAAGCGATGTCTAAAGAGCGTGGCTTC
AATACTGATGAATTGATTTACGTTGAGCACAGTAAATAA

Upstream 100 bases:

>100_bases
AGGTGAACTTTAAAAATGGATTTAACGTATTACCAAGGATGTAAGTTTATGTTTTCACAAGGCTTACTCGCATTACTAAT
AAAAACAAGCCGAGGTTAGG

Downstream 100 bases:

>100_bases
GCTGAGCGCGCTAGGTTAACGACAGTTGATTGAGAAAAAGGAACAGATGATGAGTGCATCTGTTCCTTTTTTATTGGTTT
GGTTTTGTATGAACTAGCCT

Product: outer membrane lipoprotein blc precursor

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKILLLLSVILLGGCVGMPETVKPVQQFELDRYLGKWYEVARLDHSFERGLDNISAEYSLRDDGGVKVINRGYSAEDGE
WNEAEGKAYFVEGSDQGYLKVSFFGPFYGAYVVFELDKENYQYAFVSGPDTDYLWLLSRTPEVAPEVMEKFKAMSKERGF
NTDELIYVEHSK

Sequences:

>Translated_172_residues
MKKILLLLSVILLGGCVGMPETVKPVQQFELDRYLGKWYEVARLDHSFERGLDNISAEYSLRDDGGVKVINRGYSAEDGE
WNEAEGKAYFVEGSDQGYLKVSFFGPFYGAYVVFELDKENYQYAFVSGPDTDYLWLLSRTPEVAPEVMEKFKAMSKERGF
NTDELIYVEHSK
>Mature_172_residues
MKKILLLLSVILLGGCVGMPETVKPVQQFELDRYLGKWYEVARLDHSFERGLDNISAEYSLRDDGGVKVINRGYSAEDGE
WNEAEGKAYFVEGSDQGYLKVSFFGPFYGAYVVFELDKENYQYAFVSGPDTDYLWLLSRTPEVAPEVMEKFKAMSKERGF
NTDELIYVEHSK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=166, Percent_Identity=30.7228915662651, Blast_Score=83, Evalue=1e-16,
Organism=Escherichia coli, GI1790592, Length=151, Percent_Identity=52.9801324503311, Blast_Score=177, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19687; Mature: 19687

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLLLSVILLGGCVGMPETVKPVQQFELDRYLGKWYEVARLDHSFERGLDNISAEYS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LRDDGGVKVINRGYSAEDGEWNEAEGKAYFVEGSDQGYLKVSFFGPFYGAYVVFELDKEN
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEECCCC
YQYAFVSGPDTDYLWLLSRTPEVAPEVMEKFKAMSKERGFNTDELIYVEHSK
EEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKILLLLSVILLGGCVGMPETVKPVQQFELDRYLGKWYEVARLDHSFERGLDNISAEYS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LRDDGGVKVINRGYSAEDGEWNEAEGKAYFVEGSDQGYLKVSFFGPFYGAYVVFELDKEN
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEECCCC
YQYAFVSGPDTDYLWLLSRTPEVAPEVMEKFKAMSKERGFNTDELIYVEHSK
EEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]