| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yiaV [C]
Identifier: 218710079
GI number: 218710079
Start: 2252916
End: 2253905
Strand: Direct
Name: yiaV [C]
Synonym: VS_2100
Alternate gene names: 218710079
Gene position: 2252916-2253905 (Clockwise)
Preceding gene: 218710078
Following gene: 218710080
Centisome position: 68.28
GC content: 45.76
Gene sequence:
>990_bases ATGAAAGAGATGATGATTCCATACATCCTAATTGTATGGTCACTGTTTGCGACAGGCGCACTTAAGAAGAACTTCAAGAA CTACACATGGGCTGCCATTGGTGGCGTAACGATTCTTGCGGTATTAGCGGTAATCTCTCGCTTGTGGGCACCCGTTGATT TAACCAACTCAACCACAGTGAAAGCACCACACGCGGTGATGTCACCTATCTTTGGCCAGCAGATCGACCAAGTGCTTGTT GAGCACAACCAAATGGTTAAAGAAGGCGACGTAATTTACACACTCGTCGACATTGACTCAGCCGCAGACAAAGCAAAGAT CGAATCTTCAATTGTTCAGAAAGAAGAAGAGATCAAGCAAATGAATCGCGACTTAGAGCGTGCTGAAACGTCACCTGAAA TTTTCAATATGCGTGACGTAGAAAAGTACGACTCTGATCTTCGAGTGCTGCATGCTGAACTGGTGTCGTTAAAAGCCGAC CTACAAAAAGTAAATTGGGCGCAAGAGAAGAAAACCATTAGAGCTGAATTTGATGGTCAGGTATCGATAGTGAATATTGC TGAAGGTTCTGTCATGGGTAACATGCACCTCTACAACACCAGCAAAAAGTTTCTTGAGATGCGTATTTCAGACCAAACTT ATGGCTATGTTCAAGTAGGGGACTTCGCTGAGTTCTTCGTTGATGCATACCCAGGCCACGTGTTCCGAGCAAAAGTACAC AGCTTTAATGCCGGTACTGGTGAGTCGAGTATTTCTCCACTTCAGGGGCCACAAAGCGTCGGTCAACACGTGGTAAGAAA CGGCAATGGTTTAGGTCGTACTATCGTACTTGAGATCATTGAACCAGAAGGTTACAACATCCCTATTGGTTCAACTGGCG CGGCTTGGATCTCGGCAGAGAAACCACATCCGTTCTGGGGCTTCATTGATGTAATCGGCGCAGCAACGGTTCGCCTACAA TCTTACAAGTCATACCTAGGTGCTTGGTAA
Upstream 100 bases:
>100_bases CGGTAACAGAGCCGTCTTCAGTAGAGCAATCTTCAAAAGAACAGGCTTCAGAAGAAAAGACTCCAACAACACCATCCGCT ACAGAAAAAGAGGTCGCATA
Downstream 100 bases:
>100_bases GCGCTTAAGCTCTTGGTAAACGATTAAGCATTCAATGATGTGACTGTTATTCACTCGTATAACAGCCACTCATGAACTAG CGACTAATTGTAAAACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Multidrug Resistance Protein A
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ SYKSYLGAW
Sequences:
>Translated_329_residues MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ SYKSYLGAW >Mature_329_residues MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ SYKSYLGAW
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36584; Mature: 36584
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KAPHAVMSPIFGQQIDQVLVEHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH MNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKADLQKVNWAQEKKTIRAEFDGQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC VSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH EEEEEEECCCEECCEEEECCHHHHHEEEECCCCCCEEEECHHHHHHHHCCCCCEEEEEEH SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC KPHPFWGFIDVIGAATVRLQSYKSYLGAW CCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KAPHAVMSPIFGQQIDQVLVEHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH MNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKADLQKVNWAQEKKTIRAEFDGQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC VSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH EEEEEEECCCEECCEEEECCHHHHHEEEECCCCCCEEEECHHHHHHHHCCCCCEEEEEEH SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC KPHPFWGFIDVIGAATVRLQSYKSYLGAW CCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA