| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710066
Identifier: 218710066
GI number: 218710066
Start: 2241983
End: 2242216
Strand: Direct
Name: 218710066
Synonym: VS_2086
Alternate gene names: NA
Gene position: 2241983-2242216 (Clockwise)
Preceding gene: 218710061
Following gene: 218710068
Centisome position: 67.95
GC content: 40.6
Gene sequence:
>234_bases ATGCAACACGACAACAACATGTACGCGTATGTTTATGCAGACAACGAAGGTACAGAGAACACACTTATCGCTACTGTCGA CAACCAAGAAAAGCCCCTAATCTCAAGCTGTTTTAATGAGATAAAGCGCATGTCTAACTTAGCTATTGATCTTGCAGCAG AACACAACTTGAAAGTGAAACTGGTTAAATACGGAAGAGAACAAGAGATCGACTTCGGCCTATTCCTAAAATAG
Upstream 100 bases:
>100_bases TACAAACTCTTACCTTTGATTCCTCCCATAAGCTAGCCTGAATACATAAATACTGTAACCTTCATCACACTAATAATAAA AAGCTCAGCTTAGGTAATTA
Downstream 100 bases:
>100_bases CGCAGTCATAACGCATGTCTTGTTCGGCAAGCTTAAGCAGCATGGTCAACAGCACAGAACACCGTTGAATAACATGTTAT GAGTAGGCAATCACCTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MQHDNNMYAYVYADNEGTENTLIATVDNQEKPLISSCFNEIKRMSNLAIDLAAEHNLKVKLVKYGREQEIDFGLFLK
Sequences:
>Translated_77_residues MQHDNNMYAYVYADNEGTENTLIATVDNQEKPLISSCFNEIKRMSNLAIDLAAEHNLKVKLVKYGREQEIDFGLFLK >Mature_77_residues MQHDNNMYAYVYADNEGTENTLIATVDNQEKPLISSCFNEIKRMSNLAIDLAAEHNLKVKLVKYGREQEIDFGLFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8868; Mature: 8868
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHDNNMYAYVYADNEGTENTLIATVDNQEKPLISSCFNEIKRMSNLAIDLAAEHNLKVK CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEE LVKYGREQEIDFGLFLK EEECCCCCCCCEEEEEC >Mature Secondary Structure MQHDNNMYAYVYADNEGTENTLIATVDNQEKPLISSCFNEIKRMSNLAIDLAAEHNLKVK CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEE LVKYGREQEIDFGLFLK EEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA