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The map label for this gene is 218710064

Identifier: 218710064

GI number: 218710064

Start: 2239628

End: 2241091

Strand: Reverse

Name: 218710064

Synonym: VS_2084

Alternate gene names: NA

Gene position: 2241091-2239628 (Counterclockwise)

Preceding gene: 218710065

Following gene: 218710063

Centisome position: 67.93

GC content: 47.81

Gene sequence:

>1464_bases
ATGTCAAATCAAACTGCGAAGTTTGTAGAAGGTTCAACGATGCGCCACATATTGGTGATGTCGGGGGCTGGCTCTGTTGG
TTTGATGGCGTTATTCGTGGTCGATTTACTCGATATGTTGTTCATCAGTATGTTGGGACAAGTCGAATTGGCCGCGGCTG
TTGGTTTTGCAGGCACACTGACATTTTTCTCTACCTCCGTTTCGATCGGTACTTCTATTGCTATGGGTGCGTTGGTTTCC
AAAGCTATTGGTTCAAAGAATCAAGAACACGCTCGAAACCTCGCCACGAGTATTATGCTGACCGCTTTTGTCATCAGTTT
GACGATTACTGCGGTGATGTTCGCCTATATCCCAGAGCTGCTTGCTGCGATTGGTGCAAAGGGGGTTGCCGCAGAGCGGG
CGCAAGCTTACCTGCAGATCTTATTGCCAAGCGGGCCATTTCTAGCGCTAGCGATGGCTGCGGGTGCAGGCTTGAGAGCT
GCAGGTGATGCCAAACGTTCGATGTGGGCGACCTTGTCGGGCGGCATTGTTAACGCGATTCTCGACCCTTTGTTTATTTT
TGGTTTTGGTTGGAACATCGAAGGGGCGGCTATCGCTTCTGTCTTTGCTCGTTTTTCGGTGCTCTTTTTCTCGCTTTACC
CTTTGATTCGCAGTCACCAGCTGGTGGCTCCCCCTTCTCTTGTACAATGGCGCATTAATATTCGACCAATATTGGCTATT
GCGCTGCCTGCTATTATCACCAATACCGCAACGCCTATCGGTAATGCGATTGTAACGACGGGGATTGCACAATACGGAGA
GGATTTTGTCGCGGGCTTTGCTGTGATAGGTCGTCTGACGCCGGTTTGTTTTGCGGTTATCTTTGCTTTGTCTGGCGCTG
TGGGCCCTATTATTGGGCAAAATTTTGGTGCAGAACGAATGGACAGAGTAAAAGAAACACTCAACAACTCATTGTTGGTT
ACTACGGCGTACACCATCGCCGTTTGTATTCTCTTATACTTTGTCCAAGACTATGTGATCCAAGGCTTTAGCCTACAAGG
TGATGCAGCAATTATTGTTGCCGCATTCTGTACCTATGTTGCGTTAACCTTCACCTTCAACGGCGCACTGTTTGTTGCCA
ACACGTCTTTTAATAACTTAGGTAAACCGCTTTACTCGACAGCACTGAATCTGGGTAAAGCCACTCTCGGTACATTGCCG
TTCGTTTACTTAGGCTCGCAATGGTATGGCGCATTGGGTGTGCTGTATGGGCAAGCCTTGGGCAATGTTTTGTTCGGAAT
ACTCGGTACCCTAGTGCTTCGCTATCATATTGCAGAGCTTATGCAAGGTTCCCAAGTTGATCCTGTAGAAGACGATGTGT
CGATAGTCAGCTTGAATACACAACCATTCTGTTCACATGATGCCGTTCTTATTGATGATGTATCGGCGAACAGAGAAGAG
TGTAAAGAGCTCAAGTCGCAATAA

Upstream 100 bases:

>100_bases
TGTAGAGCTTTTCTTGGTGGATCTTTTTTGTAGATCCCTAGTTTGTGGCTGACTAGCTTATAGAGCTTTATTTTGTGGTG
TTCCAACTTTTGGAGGTTTC

Downstream 100 bases:

>100_bases
CAGCGACACTCCAATATAGATTAGTTGTTTTGTAAATTTCTTCTTGGTCTTGGACAAGTTGTTCTTGACCTTGGAGTAGT
CTCCAAGGTTTATACTTTTG

Product: multi antimicrobial extrusion protein MatE

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MSNQTAKFVEGSTMRHILVMSGAGSVGLMALFVVDLLDMLFISMLGQVELAAAVGFAGTLTFFSTSVSIGTSIAMGALVS
KAIGSKNQEHARNLATSIMLTAFVISLTITAVMFAYIPELLAAIGAKGVAAERAQAYLQILLPSGPFLALAMAAGAGLRA
AGDAKRSMWATLSGGIVNAILDPLFIFGFGWNIEGAAIASVFARFSVLFFSLYPLIRSHQLVAPPSLVQWRINIRPILAI
ALPAIITNTATPIGNAIVTTGIAQYGEDFVAGFAVIGRLTPVCFAVIFALSGAVGPIIGQNFGAERMDRVKETLNNSLLV
TTAYTIAVCILLYFVQDYVIQGFSLQGDAAIIVAAFCTYVALTFTFNGALFVANTSFNNLGKPLYSTALNLGKATLGTLP
FVYLGSQWYGALGVLYGQALGNVLFGILGTLVLRYHIAELMQGSQVDPVEDDVSIVSLNTQPFCSHDAVLIDDVSANREE
CKELKSQ

Sequences:

>Translated_487_residues
MSNQTAKFVEGSTMRHILVMSGAGSVGLMALFVVDLLDMLFISMLGQVELAAAVGFAGTLTFFSTSVSIGTSIAMGALVS
KAIGSKNQEHARNLATSIMLTAFVISLTITAVMFAYIPELLAAIGAKGVAAERAQAYLQILLPSGPFLALAMAAGAGLRA
AGDAKRSMWATLSGGIVNAILDPLFIFGFGWNIEGAAIASVFARFSVLFFSLYPLIRSHQLVAPPSLVQWRINIRPILAI
ALPAIITNTATPIGNAIVTTGIAQYGEDFVAGFAVIGRLTPVCFAVIFALSGAVGPIIGQNFGAERMDRVKETLNNSLLV
TTAYTIAVCILLYFVQDYVIQGFSLQGDAAIIVAAFCTYVALTFTFNGALFVANTSFNNLGKPLYSTALNLGKATLGTLP
FVYLGSQWYGALGVLYGQALGNVLFGILGTLVLRYHIAELMQGSQVDPVEDDVSIVSLNTQPFCSHDAVLIDDVSANREE
CKELKSQ
>Mature_486_residues
SNQTAKFVEGSTMRHILVMSGAGSVGLMALFVVDLLDMLFISMLGQVELAAAVGFAGTLTFFSTSVSIGTSIAMGALVSK
AIGSKNQEHARNLATSIMLTAFVISLTITAVMFAYIPELLAAIGAKGVAAERAQAYLQILLPSGPFLALAMAAGAGLRAA
GDAKRSMWATLSGGIVNAILDPLFIFGFGWNIEGAAIASVFARFSVLFFSLYPLIRSHQLVAPPSLVQWRINIRPILAIA
LPAIITNTATPIGNAIVTTGIAQYGEDFVAGFAVIGRLTPVCFAVIFALSGAVGPIIGQNFGAERMDRVKETLNNSLLVT
TAYTIAVCILLYFVQDYVIQGFSLQGDAAIIVAAFCTYVALTFTFNGALFVANTSFNNLGKPLYSTALNLGKATLGTLPF
VYLGSQWYGALGVLYGQALGNVLFGILGTLVLRYHIAELMQGSQVDPVEDDVSIVSLNTQPFCSHDAVLIDDVSANREEC
KELKSQ

Specific function: May be a membrane-bound protein, possibly involved in IAA or IAA-Lysine transport [H]

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 51461; Mature: 51330

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQTAKFVEGSTMRHILVMSGAGSVGLMALFVVDLLDMLFISMLGQVELAAAVGFAGTL
CCCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TFFSTSVSIGTSIAMGALVSKAIGSKNQEHARNLATSIMLTAFVISLTITAVMFAYIPEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIGAKGVAAERAQAYLQILLPSGPFLALAMAAGAGLRAAGDAKRSMWATLSGGIVNAI
HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHH
LDPLFIFGFGWNIEGAAIASVFARFSVLFFSLYPLIRSHQLVAPPSLVQWRINIRPILAI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH
ALPAIITNTATPIGNAIVTTGIAQYGEDFVAGFAVIGRLTPVCFAVIFALSGAVGPIIGQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
NFGAERMDRVKETLNNSLLVTTAYTIAVCILLYFVQDYVIQGFSLQGDAAIIVAAFCTYV
CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALTFTFNGALFVANTSFNNLGKPLYSTALNLGKATLGTLPFVYLGSQWYGALGVLYGQAL
HHHEEECCEEEEEECCHHHHCCHHHHHHHHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHH
GNVLFGILGTLVLRYHIAELMQGSQVDPVEDDVSIVSLNTQPFCSHDAVLIDDVSANREE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHH
CKELKSQ
HHHHHCC
>Mature Secondary Structure 
SNQTAKFVEGSTMRHILVMSGAGSVGLMALFVVDLLDMLFISMLGQVELAAAVGFAGTL
CCCCCHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TFFSTSVSIGTSIAMGALVSKAIGSKNQEHARNLATSIMLTAFVISLTITAVMFAYIPEL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAIGAKGVAAERAQAYLQILLPSGPFLALAMAAGAGLRAAGDAKRSMWATLSGGIVNAI
HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHH
LDPLFIFGFGWNIEGAAIASVFARFSVLFFSLYPLIRSHQLVAPPSLVQWRINIRPILAI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH
ALPAIITNTATPIGNAIVTTGIAQYGEDFVAGFAVIGRLTPVCFAVIFALSGAVGPIIGQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
NFGAERMDRVKETLNNSLLVTTAYTIAVCILLYFVQDYVIQGFSLQGDAAIIVAAFCTYV
CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALTFTFNGALFVANTSFNNLGKPLYSTALNLGKATLGTLPFVYLGSQWYGALGVLYGQAL
HHHEEECCEEEEEECCHHHHCCHHHHHHHHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHH
GNVLFGILGTLVLRYHIAELMQGSQVDPVEDDVSIVSLNTQPFCSHDAVLIDDVSANREE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHH
CKELKSQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2377619 [H]