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The map label for this gene is ycfN [C]

Identifier: 218710054

GI number: 218710054

Start: 2227620

End: 2228486

Strand: Reverse

Name: ycfN [C]

Synonym: VS_2074

Alternate gene names: 218710054

Gene position: 2228486-2227620 (Counterclockwise)

Preceding gene: 218710055

Following gene: 218710053

Centisome position: 67.54

GC content: 47.52

Gene sequence:

>867_bases
ATGGCGATTTTTTCTTGGTCTGAAGCAAAGCTTCTTGATACCAGTTTGAGTTCTCTTGATGGCTACTTTTCTGAGCCTCC
AATCAGAGCACAGACACTGACAGGTGGGTTGACTAATCGATGTTGGAAATTGGTTTTAGCCGATGGCACCGCGTATGTTT
GGCGTCCAATTACCCCCATCACTAAAGCGTTCTTCATCTCTCGCCATGAAGAGTATCAAGTACTGTCTGCTATTGAGCGC
TTAGATATCGGCCCAAGTCCGATAGTGGTCAATGAGCAAGGCTTATTGGTTGAATGGATCGCGGGTGAGACGTTGTACGA
AGGACTAGAGCAGGATGATTTACTGAAGACGCTGATCTCGGTGCATTTGGTTAATACTGCGCGACTGCCGCTCCAACCGT
TCAGCTATACGGCTCGAGTTGACCACTACTGGCTTCAGCTTGATGCGATTCATAAGACCGAAGCCTGTACTAAGATTTAT
CAAGAGTGGCGCGTGGCTCCTAGTATTACCAATGTTGACCTGTCTTTGTGCCATTTTGACTTAGGAGGTTATAACCTAGT
GAGAAACAGTGACTGCATTAAGATTATTGATTGGGAATACGCTGCGCTCGCAGACCCTAGGCTCGATTTAACATTAACCA
TTGCGGTTGCTGGCGCGCCAGTCACAGAAGCGGTTGAGAAGTACTGTCAGCTGCGAGGAATCCATGATGTTCAGCCTTGG
CTTGACGGTGTAGAAGCATGGTTACCAAGAAGCCAGATGATGGCGATGTTGTGGTATTTGCTTGCTCATCAGCTTTGGGG
CGGTGACGGTTATCTGCGTGAAGCTGAGGCTTTGAGTCACACTTTATGTAGCTATGATCACGTTTAG

Upstream 100 bases:

>100_bases
GATTGGTATTAATGAAGAGGCACTGGCTTTTGGTCAGTGCCTTTTTTTTAGGGAAATTAAGACGTTTATAGGGCAGTTAA
GACGTCTATAGGGAGTAAAT

Downstream 100 bases:

>100_bases
GAAGTGAAAAATATAATTTCAGAGGTCTTCCCTTTAAAACCTTGTTTTTCGTGTTAGATTGATCAAAACGTACCAATATT
CAATGGGGGAGGTACAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphotransferase Family; Antibiotic Resistance Protein

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MAIFSWSEAKLLDTSLSSLDGYFSEPPIRAQTLTGGLTNRCWKLVLADGTAYVWRPITPITKAFFISRHEEYQVLSAIER
LDIGPSPIVVNEQGLLVEWIAGETLYEGLEQDDLLKTLISVHLVNTARLPLQPFSYTARVDHYWLQLDAIHKTEACTKIY
QEWRVAPSITNVDLSLCHFDLGGYNLVRNSDCIKIIDWEYAALADPRLDLTLTIAVAGAPVTEAVEKYCQLRGIHDVQPW
LDGVEAWLPRSQMMAMLWYLLAHQLWGGDGYLREAEALSHTLCSYDHV

Sequences:

>Translated_288_residues
MAIFSWSEAKLLDTSLSSLDGYFSEPPIRAQTLTGGLTNRCWKLVLADGTAYVWRPITPITKAFFISRHEEYQVLSAIER
LDIGPSPIVVNEQGLLVEWIAGETLYEGLEQDDLLKTLISVHLVNTARLPLQPFSYTARVDHYWLQLDAIHKTEACTKIY
QEWRVAPSITNVDLSLCHFDLGGYNLVRNSDCIKIIDWEYAALADPRLDLTLTIAVAGAPVTEAVEKYCQLRGIHDVQPW
LDGVEAWLPRSQMMAMLWYLLAHQLWGGDGYLREAEALSHTLCSYDHV
>Mature_287_residues
AIFSWSEAKLLDTSLSSLDGYFSEPPIRAQTLTGGLTNRCWKLVLADGTAYVWRPITPITKAFFISRHEEYQVLSAIERL
DIGPSPIVVNEQGLLVEWIAGETLYEGLEQDDLLKTLISVHLVNTARLPLQPFSYTARVDHYWLQLDAIHKTEACTKIYQ
EWRVAPSITNVDLSLCHFDLGGYNLVRNSDCIKIIDWEYAALADPRLDLTLTIAVAGAPVTEAVEKYCQLRGIHDVQPWL
DGVEAWLPRSQMMAMLWYLLAHQLWGGDGYLREAEALSHTLCSYDHV

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32595; Mature: 32463

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFSWSEAKLLDTSLSSLDGYFSEPPIRAQTLTGGLTNRCWKLVLADGTAYVWRPITPI
CCEECCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHEEEEEEECCCEEEEECCCHH
TKAFFISRHEEYQVLSAIERLDIGPSPIVVNEQGLLVEWIAGETLYEGLEQDDLLKTLIS
HHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHH
VHLVNTARLPLQPFSYTARVDHYWLQLDAIHKTEACTKIYQEWRVAPSITNVDLSLCHFD
HHHHHCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
LGGYNLVRNSDCIKIIDWEYAALADPRLDLTLTIAVAGAPVTEAVEKYCQLRGIHDVQPW
CCCCEEEECCCCEEEEECCHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHH
LDGVEAWLPRSQMMAMLWYLLAHQLWGGDGYLREAEALSHTLCSYDHV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIFSWSEAKLLDTSLSSLDGYFSEPPIRAQTLTGGLTNRCWKLVLADGTAYVWRPITPI
CEECCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHEEEEEEECCCEEEEECCCHH
TKAFFISRHEEYQVLSAIERLDIGPSPIVVNEQGLLVEWIAGETLYEGLEQDDLLKTLIS
HHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHH
VHLVNTARLPLQPFSYTARVDHYWLQLDAIHKTEACTKIYQEWRVAPSITNVDLSLCHFD
HHHHHCCCCCCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
LGGYNLVRNSDCIKIIDWEYAALADPRLDLTLTIAVAGAPVTEAVEKYCQLRGIHDVQPW
CCCCEEEECCCCEEEEECCHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHH
LDGVEAWLPRSQMMAMLWYLLAHQLWGGDGYLREAEALSHTLCSYDHV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA