Click here to switch to the map view.

The map label for this gene is hflD

Identifier: 218710013

GI number: 218710013

Start: 2179192

End: 2179809

Strand: Direct

Name: hflD

Synonym: VS_2033

Alternate gene names: 218710013

Gene position: 2179192-2179809 (Clockwise)

Preceding gene: 218710012

Following gene: 218710014

Centisome position: 66.05

GC content: 47.9

Gene sequence:

>618_bases
GTGGCTAATACACTTTATGACCGTACTATTGCTTTCGCTGGAATTTGCCAAGCTGTGGCTTTGGTTCAACAAGTAGCGAA
AGACGGCCATTGTGATAAAGATGCCTTCGAAGCTTCACTCAGTGCCATTTTAAATACCAATCCAGCGAACACCGTGGGTG
TCTTTGGACGTGAAGCGAACCTAAAGCTTGGCCTTGAGTGCTTAGTAAAAGGTATCGATAGTACTCCCGCTGGTAGCGAT
ATTACTCGCTACATCATCAGCTTGATGGCACTTGAGCGTAAGCTATCTTCTCGTAACGACTCTATGTCTCAGCTTGGCGA
TCGTATTCAAACTGCAGAACGTCAAACTGAACACTTTGATCTGTTTGACGAGCAAATGATCAGCAACCTAGCCAGTATCT
ACCTTGATGTTGTGAGCCCTATCGGCCCGCGTATTCAGGTTTCTGGTACGCCAGCTGTACTTCAACAGACGTCGAGCCAG
CATAAGGTTCGTGCCCTGCTGTTATCAGGAATTCGAAGCGCTGTGTTATGGCGTCAAGTTGGCGGTAAACGTCGCCACCT
TATCTTCGGTCGCAAGAAGATGATCGAGCAGGCTCAAATCCTGCTAGCTCGCATGTGA

Upstream 100 bases:

>100_bases
TTCTACCTAGACAACGTATGTCTTGGTGGTGGTATCATTGAAAAGCGCATCTAACCAATAATCGAACGACAAACAATAGA
AGACAACTAGGAGTTACTAC

Downstream 100 bases:

>100_bases
TTTATTAGCTCGCGCCTCGTCGCGAGCTTGTTTTTTGTACCAACACAACTCTCACGCAAACGATTGCGCAATATGCGTGA
CAATTGAGATTGTTACTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MANTLYDRTIAFAGICQAVALVQQVAKDGHCDKDAFEASLSAILNTNPANTVGVFGREANLKLGLECLVKGIDSTPAGSD
ITRYIISLMALERKLSSRNDSMSQLGDRIQTAERQTEHFDLFDEQMISNLASIYLDVVSPIGPRIQVSGTPAVLQQTSSQ
HKVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMIEQAQILLARM

Sequences:

>Translated_205_residues
MANTLYDRTIAFAGICQAVALVQQVAKDGHCDKDAFEASLSAILNTNPANTVGVFGREANLKLGLECLVKGIDSTPAGSD
ITRYIISLMALERKLSSRNDSMSQLGDRIQTAERQTEHFDLFDEQMISNLASIYLDVVSPIGPRIQVSGTPAVLQQTSSQ
HKVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMIEQAQILLARM
>Mature_204_residues
ANTLYDRTIAFAGICQAVALVQQVAKDGHCDKDAFEASLSAILNTNPANTVGVFGREANLKLGLECLVKGIDSTPAGSDI
TRYIISLMALERKLSSRNDSMSQLGDRIQTAERQTEHFDLFDEQMISNLASIYLDVVSPIGPRIQVSGTPAVLQQTSSQH
KVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMIEQAQILLARM

Specific function: Unknown

COG id: COG2915

COG function: function code R; Uncharacterized protein involved in purine metabolism

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hflD family

Homologues:

Organism=Escherichia coli, GI1787377, Length=209, Percent_Identity=52.6315789473684, Blast_Score=226, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HFLD_VIBSL (B7VH09)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002417634.1
- ProteinModelPortal:   B7VH09
- SMR:   B7VH09
- GeneID:   7161588
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2033
- HOGENOM:   HBG739519
- OMA:   LLHNYFR
- ProtClustDB:   PRK00218
- GO:   GO:0005737
- HAMAP:   MF_00695
- InterPro:   IPR007451
- ProDom:   PD037115

Pfam domain/function: PF04356 DUF489; SSF101322 DUF489

EC number: NA

Molecular weight: Translated: 22509; Mature: 22378

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTLYDRTIAFAGICQAVALVQQVAKDGHCDKDAFEASLSAILNTNPANTVGVFGREAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCC
LKLGLECLVKGIDSTPAGSDITRYIISLMALERKLSSRNDSMSQLGDRIQTAERQTEHFD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LFDEQMISNLASIYLDVVSPIGPRIQVSGTPAVLQQTSSQHKVRALLLSGIRSAVLWRQV
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GGKRRHLIFGRKKMIEQAQILLARM
CCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANTLYDRTIAFAGICQAVALVQQVAKDGHCDKDAFEASLSAILNTNPANTVGVFGREAN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCC
LKLGLECLVKGIDSTPAGSDITRYIISLMALERKLSSRNDSMSQLGDRIQTAERQTEHFD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LFDEQMISNLASIYLDVVSPIGPRIQVSGTPAVLQQTSSQHKVRALLLSGIRSAVLWRQV
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GGKRRHLIFGRKKMIEQAQILLARM
CCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA