| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is trpG [H]
Identifier: 218709948
GI number: 218709948
Start: 2110711
End: 2111355
Strand: Direct
Name: trpG [H]
Synonym: VS_1967
Alternate gene names: 218709948
Gene position: 2110711-2111355 (Clockwise)
Preceding gene: 218709947
Following gene: 218709949
Centisome position: 63.97
GC content: 46.82
Gene sequence:
>645_bases ATGGCTGATATTGTATTCATCGATAACTTCGACTCGTTCACTTACAACCTTGTAGACCAGTTCCGTTCATTAGGTCACAG CGTGAAAATTTACCGTAACAATATTCCTGCAAAGGTAGTTGAAGCGGCGATCAACGAACTAGACAACCCTGTTGCACTGC TTTCACCAGGCCCTGGCGCTCCAGCAGATGCGGGCTGTATGCCAGAGCTGATTCAGCTTCTAAAAGGTAAAGTACCAATG ATTGGTATTTGCTTAGGCCACCAAGCGATTGTTGAGGCTTACGGCGGCACCGTTGCAGGCGCTGGCGAAATCATTCATGG TAAGGTGTCGATGATGGAACACCAAAACCATGCGACTTACCAAGGCTTACCTTCACCACTGGCTATTGCTCGTTACCACT CTTTAGTGGCAACGCATGTATCTGATAGCCTAACGGTGACAGCTGAAGTCGATGATTTGGTGATGTCTGTGGTTCAAGAA CAAGACAAGGTTTGTGGATTCCAATTCCACCCTGAATCAATTATGACGACCTACGGTGCAACGCTTCTAGCAAACGCTAT CGAATGGGCTCTTGAGAAACCTCTTCATTTAGAGAAAAGCTCTCCCCTTGAGAAGACAGCGACTCTTGACCAAAAGACTA ACTAG
Upstream 100 bases:
>100_bases AAGCAGAAGCAGATGAAACTCGCGGCAAAGCTCAAGCGGTCATCTCTGCGATTCAAGCAGCTCATACTAAAAACCTAACA ACTAAGAAGGAGTCGTAATC
Downstream 100 bases:
>100_bases GAAACGATCATGGAACAGATTAATAAACTTTACGAACAGCAGTCTCTTACTCAAGAAGAAAGCCAACAATTGTTTGATGT GATCATCAAGGGTGAGCTAG
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MADIVFIDNFDSFTYNLVDQFRSLGHSVKIYRNNIPAKVVEAAINELDNPVALLSPGPGAPADAGCMPELIQLLKGKVPM IGICLGHQAIVEAYGGTVAGAGEIIHGKVSMMEHQNHATYQGLPSPLAIARYHSLVATHVSDSLTVTAEVDDLVMSVVQE QDKVCGFQFHPESIMTTYGATLLANAIEWALEKPLHLEKSSPLEKTATLDQKTN
Sequences:
>Translated_214_residues MADIVFIDNFDSFTYNLVDQFRSLGHSVKIYRNNIPAKVVEAAINELDNPVALLSPGPGAPADAGCMPELIQLLKGKVPM IGICLGHQAIVEAYGGTVAGAGEIIHGKVSMMEHQNHATYQGLPSPLAIARYHSLVATHVSDSLTVTAEVDDLVMSVVQE QDKVCGFQFHPESIMTTYGATLLANAIEWALEKPLHLEKSSPLEKTATLDQKTN >Mature_213_residues ADIVFIDNFDSFTYNLVDQFRSLGHSVKIYRNNIPAKVVEAAINELDNPVALLSPGPGAPADAGCMPELIQLLKGKVPMI GICLGHQAIVEAYGGTVAGAGEIIHGKVSMMEHQNHATYQGLPSPLAIARYHSLVATHVSDSLTVTAEVDDLVMSVVQEQ DKVCGFQFHPESIMTTYGATLLANAIEWALEKPLHLEKSSPLEKTATLDQKTN
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=204, Percent_Identity=57.3529411764706, Blast_Score=253, Evalue=5e-69, Organism=Escherichia coli, GI1789760, Length=187, Percent_Identity=40.1069518716578, Blast_Score=140, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6322638, Length=188, Percent_Identity=39.8936170212766, Blast_Score=144, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6324361, Length=214, Percent_Identity=30.8411214953271, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 23079; Mature: 22947
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVFIDNFDSFTYNLVDQFRSLGHSVKIYRNNIPAKVVEAAINELDNPVALLSPGPGA CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCC PADAGCMPELIQLLKGKVPMIGICLGHQAIVEAYGGTVAGAGEIIHGKVSMMEHQNHATY CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCC QGLPSPLAIARYHSLVATHVSDSLTVTAEVDDLVMSVVQEQDKVCGFQFHPESIMTTYGA CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH TLLANAIEWALEKPLHLEKSSPLEKTATLDQKTN HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure ADIVFIDNFDSFTYNLVDQFRSLGHSVKIYRNNIPAKVVEAAINELDNPVALLSPGPGA CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCC PADAGCMPELIQLLKGKVPMIGICLGHQAIVEAYGGTVAGAGEIIHGKVSMMEHQNHATY CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCC QGLPSPLAIARYHSLVATHVSDSLTVTAEVDDLVMSVVQEQDKVCGFQFHPESIMTTYGA CCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH TLLANAIEWALEKPLHLEKSSPLEKTATLDQKTN HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]