| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is trpE [H]
Identifier: 218709947
GI number: 218709947
Start: 2109071
End: 2110708
Strand: Direct
Name: trpE [H]
Synonym: VS_1966
Alternate gene names: 218709947
Gene position: 2109071-2110708 (Clockwise)
Preceding gene: 218709943
Following gene: 218709948
Centisome position: 63.92
GC content: 45.97
Gene sequence:
>1638_bases ATGCGACTATGTACGGCAGGAAATTTAAAGAATCATAAAGGAGGTCTTGTGAACAAGGCCATTGAAATCAAAAAGCTGGG AACCATTGAGGTCATCAATTCTTCCGTTCCTTACTCGCAAGATCCAACCAGTGTTTTTCATACTCTGTGTGAAAACAAAA CAGACAGTCTGTTGTTGGAATCTGCTGAGATTGAATCTAAACAGAACTTGACAAGTCTACTCCTTATCGACTCTGCTGTT CGCATCGTATGTCGCGGACATGAAGTAACCTTTCAAGCCTTGACTCAAAATGGTCAAGCGCTTATCGAACACCTATCTCA AAACGTTAAAACAGAGATCAAATCTGACCTTACGAATAACGTTTTGACGCTGACTTTTGTTGAGCCAAGTAACGAATTAG ACGAAGACTCACGTTTAAGAGAAGCGTCTTCATTCGATGCACTGCGTTTGGTTCAGCATAGCTTTGAGCAAGACGCGGAT AACAAACACGCGTTATTCATGGCGGGCCTATTCGCTTACGACATCGTGGCGAACTTTGAACCGCTAGGCGATGCTGAAGC GACCAACAATTGTCCTGACTTTGTTTTCTACGTTGCTGAAACACTATTACGTTTCGACCACCAAGAAAACGAAGGTCTGC TTCACGCAAGCTTATTCACTCAAGATGAGAGCATTAAAGCGCAATTAACTGAGCGCCTAGCCGACATTCAAACACAGTGT CAGTCATTGAAAGCCATCACAGAAGTTACGCCACTCGACAACGTTGACGCTGTACCGAGTGTTTCAGATGAAGACTTCTG CCAAACGGTTCGTGATTTAAAAGAATACGTCGTTAAAGGCGATGTATTCCAAGTGGTACCTTCACGTCGCTTTACGCTAC CTTGCCCTGCTCCACTGGCGGCTTACAAAGAACTCAAGCAAAGTAACCCAAGCCCTTACATGTTCTACATGCAAGATGAG CTGTTTACTCTGTTTGGTGCTTCTCCAGAAAGCGCGCTGAAGTACGAAACTGAAACCAACCAAATCGAGATTTACCCAAT TGCTGGTACTCGTCGTCGTGGTAAGCGCCCGAATGGGCAAATTGATTTCGACCTAGATAGCCGTATCGAACTTGAACTGC GTACCGACAAGAAAGAAAACGCTGAACACATGATGCTGGTCGACCTAGCACGTAACGATGTGGCACGTATTGCAGAAGCT GGCACTCGCCACGTAGCAGACTTGCTGAAAGTTGATCGCTACAGTCATGTGATGCACTTGGTTTCTCGTGTTGTTGGTCA ACTACGTGAAGACTTAGATGCCCTGCACGCTTACCAAGCTTGTATGAACATGGGTACGCTAACAGGCGCACCAAAAATCC GTGCAATGCAGCTTATTCGTGACGTAGAAAAAACACGTCGTGGTAGCTACGGCGGTGCAGTTGGTTACCTAACTGGTGAA GGCACGTTAGATACTTGTATCGTGATTCGCTCTGCTTACGTTGAAGATGGCGTGGCACAAGTACAAGCGGGCGCAGGTGT GGTATTCGACTCAGACCCACAAGCAGAAGCAGATGAAACTCGCGGCAAAGCTCAAGCGGTCATCTCTGCGATTCAAGCAG CTCATACTAAAAACCTAACAACTAAGAAGGAGTCGTAA
Upstream 100 bases:
>100_bases GCTTTCATAGCGGGCTTTTTAATTTGTCGAACATCTCACATTCAACTGACTAACAAATCAACGAATTAACCATATTCTAG ATTGGGTGGAAGGTATCTTT
Downstream 100 bases:
>100_bases TCATGGCTGATATTGTATTCATCGATAACTTCGACTCGTTCACTTACAACCTTGTAGACCAGTTCCGTTCATTAGGTCAC AGCGTGAAAATTTACCGTAA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MRLCTAGNLKNHKGGLVNKAIEIKKLGTIEVINSSVPYSQDPTSVFHTLCENKTDSLLLESAEIESKQNLTSLLLIDSAV RIVCRGHEVTFQALTQNGQALIEHLSQNVKTEIKSDLTNNVLTLTFVEPSNELDEDSRLREASSFDALRLVQHSFEQDAD NKHALFMAGLFAYDIVANFEPLGDAEATNNCPDFVFYVAETLLRFDHQENEGLLHASLFTQDESIKAQLTERLADIQTQC QSLKAITEVTPLDNVDAVPSVSDEDFCQTVRDLKEYVVKGDVFQVVPSRRFTLPCPAPLAAYKELKQSNPSPYMFYMQDE LFTLFGASPESALKYETETNQIEIYPIAGTRRRGKRPNGQIDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARIAEA GTRHVADLLKVDRYSHVMHLVSRVVGQLREDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGSYGGAVGYLTGE GTLDTCIVIRSAYVEDGVAQVQAGAGVVFDSDPQAEADETRGKAQAVISAIQAAHTKNLTTKKES
Sequences:
>Translated_545_residues MRLCTAGNLKNHKGGLVNKAIEIKKLGTIEVINSSVPYSQDPTSVFHTLCENKTDSLLLESAEIESKQNLTSLLLIDSAV RIVCRGHEVTFQALTQNGQALIEHLSQNVKTEIKSDLTNNVLTLTFVEPSNELDEDSRLREASSFDALRLVQHSFEQDAD NKHALFMAGLFAYDIVANFEPLGDAEATNNCPDFVFYVAETLLRFDHQENEGLLHASLFTQDESIKAQLTERLADIQTQC QSLKAITEVTPLDNVDAVPSVSDEDFCQTVRDLKEYVVKGDVFQVVPSRRFTLPCPAPLAAYKELKQSNPSPYMFYMQDE LFTLFGASPESALKYETETNQIEIYPIAGTRRRGKRPNGQIDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARIAEA GTRHVADLLKVDRYSHVMHLVSRVVGQLREDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGSYGGAVGYLTGE GTLDTCIVIRSAYVEDGVAQVQAGAGVVFDSDPQAEADETRGKAQAVISAIQAAHTKNLTTKKES >Mature_545_residues MRLCTAGNLKNHKGGLVNKAIEIKKLGTIEVINSSVPYSQDPTSVFHTLCENKTDSLLLESAEIESKQNLTSLLLIDSAV RIVCRGHEVTFQALTQNGQALIEHLSQNVKTEIKSDLTNNVLTLTFVEPSNELDEDSRLREASSFDALRLVQHSFEQDAD NKHALFMAGLFAYDIVANFEPLGDAEATNNCPDFVFYVAETLLRFDHQENEGLLHASLFTQDESIKAQLTERLADIQTQC QSLKAITEVTPLDNVDAVPSVSDEDFCQTVRDLKEYVVKGDVFQVVPSRRFTLPCPAPLAAYKELKQSNPSPYMFYMQDE LFTLFGASPESALKYETETNQIEIYPIAGTRRRGKRPNGQIDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARIAEA GTRHVADLLKVDRYSHVMHLVSRVVGQLREDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGSYGGAVGYLTGE GTLDTCIVIRSAYVEDGVAQVQAGAGVVFDSDPQAEADETRGKAQAVISAIQAAHTKNLTTKKES
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=514, Percent_Identity=58.7548638132296, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI1788114, Length=366, Percent_Identity=31.6939890710383, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1786809, Length=215, Percent_Identity=31.1627906976744, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87082077, Length=275, Percent_Identity=27.6363636363636, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=377, Percent_Identity=36.604774535809, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324361, Length=289, Percent_Identity=27.3356401384083, Blast_Score=93, Evalue=1e-19,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 60464; Mature: 60464
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLCTAGNLKNHKGGLVNKAIEIKKLGTIEVINSSVPYSQDPTSVFHTLCENKTDSLLLE CCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEH SAEIESKQNLTSLLLIDSAVRIVCRGHEVTFQALTQNGQALIEHLSQNVKTEIKSDLTNN HHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC VLTLTFVEPSNELDEDSRLREASSFDALRLVQHSFEQDADNKHALFMAGLFAYDIVANFE EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC PLGDAEATNNCPDFVFYVAETLLRFDHQENEGLLHASLFTQDESIKAQLTERLADIQTQC CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH QSLKAITEVTPLDNVDAVPSVSDEDFCQTVRDLKEYVVKGDVFQVVPSRRFTLPCPAPLA HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCHHH AYKELKQSNPSPYMFYMQDELFTLFGASPESALKYETETNQIEIYPIAGTRRRGKRPNGQ HHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCCC IDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARIAEAGTRHVADLLKVDRYSHVMHL EEECCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRVVGQLREDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGSYGGAVGYLTGE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC GTLDTCIVIRSAYVEDGVAQVQAGAGVVFDSDPQAEADETRGKAQAVISAIQAAHTKNLT CCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TKKES CCCCC >Mature Secondary Structure MRLCTAGNLKNHKGGLVNKAIEIKKLGTIEVINSSVPYSQDPTSVFHTLCENKTDSLLLE CCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEH SAEIESKQNLTSLLLIDSAVRIVCRGHEVTFQALTQNGQALIEHLSQNVKTEIKSDLTNN HHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC VLTLTFVEPSNELDEDSRLREASSFDALRLVQHSFEQDADNKHALFMAGLFAYDIVANFE EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC PLGDAEATNNCPDFVFYVAETLLRFDHQENEGLLHASLFTQDESIKAQLTERLADIQTQC CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH QSLKAITEVTPLDNVDAVPSVSDEDFCQTVRDLKEYVVKGDVFQVVPSRRFTLPCPAPLA HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCEECCCCCHHH AYKELKQSNPSPYMFYMQDELFTLFGASPESALKYETETNQIEIYPIAGTRRRGKRPNGQ HHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCCC IDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARIAEAGTRHVADLLKVDRYSHVMHL EEECCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRVVGQLREDLDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGSYGGAVGYLTGE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC GTLDTCIVIRSAYVEDGVAQVQAGAGVVFDSDPQAEADETRGKAQAVISAIQAAHTKNLT CCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TKKES CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]