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The map label for this gene is trpH [H]

Identifier: 218709946

GI number: 218709946

Start: 2107832

End: 2108755

Strand: Reverse

Name: trpH [H]

Synonym: VS_1964

Alternate gene names: 218709946

Gene position: 2108755-2107832 (Counterclockwise)

Preceding gene: 218709953

Following gene: 218709945

Centisome position: 63.92

GC content: 45.35

Gene sequence:

>924_bases
TTGCGCTTGCAGGTCAAGTGCGTTGACACAAATATAACGATAAAAATTGAAAACAATGAAAAAGAATATATGAGAATTGA
TCTACATAGTCATACAACAGCCTCAGATGGCCGACTTACTCCACCTGAACTGATTGACCGAGCGCTAGGCTTTAACATCG
AAGTGTTAGCGATTACAGATCATGATACGACTGATGGGCTTGCTGAAGCACGCAGCTATATTGCTGATAACAATCTCCCT
ATTCAGTTGATTAACGGCATCGAGATCTCAACCGTTTGGCAAAACAAAGATATCCATATTGTTGGGTTAAACGTCGATCC
TGAATCACCAGAATTGAAAGCGTTAATTGAACAACAGAAGCAACACCGTGTCGGACGTGCAGAGATGATTGCTCAACGTC
TTGAGAAAGCGACTCGTGAAGGTGTGTTAGAAGAGGTTAAGTTGATTGCAGGTGATGCGCCAATTACTCGAGCACACTTT
GCGAAATGGTTAGTCGACAATGGCTACGCGAAAACCATGCAGCAGGTGTTTAAAAAGTTTCTTACGCGCAACAATCCAGG
TTATGTGCCGCCAACATGGTGCTCAATGAGTGATGCTGTCACGGCTATTCATGCAGCTGGTGGTCAAGCGGTATTAGCTC
ACCCTGCGCGATATGGCCTTACCGCCAAGTGGGTTAAACGCCTTCTCGCTGCATTTGTTGAAGCAAATGGTGACGCTATG
GAAGTGGCTCAACCTCAGCAAGCGCAACAAGAAAGACGCACACTTGCGGATTATGCTATACAATACAAACTATTAGCCTC
CCAAGGCAGCGACTTCCATTACCCATCCCCATGGATGGAACTTGGACGTAATCTCTGGCTACCTTCTGGGGTCGAAGAAG
TATGGAAAGATTGGGAGTTTCAAACGGTTTCACCATCTGAATAG

Upstream 100 bases:

>100_bases
AAAGTTCTAAAACTTTATCTTTATGGTTTTGGTTAAATTCTTGTAACATAGTGAACCTATCAAATGTGATACTTCGTATT
TGTGTACTAGTTAACTAGTT

Downstream 100 bases:

>100_bases
TCTTTAGGTGAACCAGCTCCTTCTGATGATAGAGTCGAGAGATTCGATAGCGAGGATCAACAATGAGCCAGTTTTTTTAT
GTACACCCAGATAACCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRLQVKCVDTNITIKIENNEKEYMRIDLHSHTTASDGRLTPPELIDRALGFNIEVLAITDHDTTDGLAEARSYIADNNLP
IQLINGIEISTVWQNKDIHIVGLNVDPESPELKALIEQQKQHRVGRAEMIAQRLEKATREGVLEEVKLIAGDAPITRAHF
AKWLVDNGYAKTMQQVFKKFLTRNNPGYVPPTWCSMSDAVTAIHAAGGQAVLAHPARYGLTAKWVKRLLAAFVEANGDAM
EVAQPQQAQQERRTLADYAIQYKLLASQGSDFHYPSPWMELGRNLWLPSGVEEVWKDWEFQTVSPSE

Sequences:

>Translated_307_residues
MRLQVKCVDTNITIKIENNEKEYMRIDLHSHTTASDGRLTPPELIDRALGFNIEVLAITDHDTTDGLAEARSYIADNNLP
IQLINGIEISTVWQNKDIHIVGLNVDPESPELKALIEQQKQHRVGRAEMIAQRLEKATREGVLEEVKLIAGDAPITRAHF
AKWLVDNGYAKTMQQVFKKFLTRNNPGYVPPTWCSMSDAVTAIHAAGGQAVLAHPARYGLTAKWVKRLLAAFVEANGDAM
EVAQPQQAQQERRTLADYAIQYKLLASQGSDFHYPSPWMELGRNLWLPSGVEEVWKDWEFQTVSPSE
>Mature_307_residues
MRLQVKCVDTNITIKIENNEKEYMRIDLHSHTTASDGRLTPPELIDRALGFNIEVLAITDHDTTDGLAEARSYIADNNLP
IQLINGIEISTVWQNKDIHIVGLNVDPESPELKALIEQQKQHRVGRAEMIAQRLEKATREGVLEEVKLIAGDAPITRAHF
AKWLVDNGYAKTMQQVFKKFLTRNNPGYVPPTWCSMSDAVTAIHAAGGQAVLAHPARYGLTAKWVKRLLAAFVEANGDAM
EVAQPQQAQQERRTLADYAIQYKLLASQGSDFHYPSPWMELGRNLWLPSGVEEVWKDWEFQTVSPSE

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=273, Percent_Identity=56.7765567765568, Blast_Score=321, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 34537; Mature: 34537

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQVKCVDTNITIKIENNEKEYMRIDLHSHTTASDGRLTPPELIDRALGFNIEVLAITD
CEEEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEC
HDTTDGLAEARSYIADNNLPIQLINGIEISTVWQNKDIHIVGLNVDPESPELKALIEQQK
CCCCHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHH
QHRVGRAEMIAQRLEKATREGVLEEVKLIAGDAPITRAHFAKWLVDNGYAKTMQQVFKKF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LTRNNPGYVPPTWCSMSDAVTAIHAAGGQAVLAHPARYGLTAKWVKRLLAAFVEANGDAM
HHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHCCCCEE
EVAQPQQAQQERRTLADYAIQYKLLASQGSDFHYPSPWMELGRNLWLPSGVEEVWKDWEF
ECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCE
QTVSPSE
EECCCCC
>Mature Secondary Structure
MRLQVKCVDTNITIKIENNEKEYMRIDLHSHTTASDGRLTPPELIDRALGFNIEVLAITD
CEEEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEC
HDTTDGLAEARSYIADNNLPIQLINGIEISTVWQNKDIHIVGLNVDPESPELKALIEQQK
CCCCHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHH
QHRVGRAEMIAQRLEKATREGVLEEVKLIAGDAPITRAHFAKWLVDNGYAKTMQQVFKKF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LTRNNPGYVPPTWCSMSDAVTAIHAAGGQAVLAHPARYGLTAKWVKRLLAAFVEANGDAM
HHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHCCCCEE
EVAQPQQAQQERRTLADYAIQYKLLASQGSDFHYPSPWMELGRNLWLPSGVEEVWKDWEF
ECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCE
QTVSPSE
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]