Click here to switch to the map view.

The map label for this gene is 218709933

Identifier: 218709933

GI number: 218709933

Start: 2091588

End: 2092841

Strand: Reverse

Name: 218709933

Synonym: VS_1946

Alternate gene names: NA

Gene position: 2092841-2091588 (Counterclockwise)

Preceding gene: 218709934

Following gene: 218709932

Centisome position: 63.43

GC content: 45.69

Gene sequence:

>1254_bases
ATGGCTATTCTACAAATTGGTGCAGGCGGCGTTGGTTGGGTTGTTGCACACAAAGCAGCACAAAATAACGAAGTACTGGG
TGATATCACAATCGCTTCTCGCACAATCGCGAAGTGTGAAAAAATCATCGAATCTATCAAGGCTAAAAACAACCTTAAAG
ATTCAACTAAGAAACTAGAAGCACGTTCAGTAGACGCTGATGATGTTGATGCGCTTGTTGCTTTGATTAAAGAAGTTCAG
CCGGATCTAGTGATCAACGCTGGTCCTCCTTGGGTAAACATGGCAATCATGGAAGCGTGTTACCAATCTAAAGTCTCTTA
TTTAGATACATCGGTTGCGGTTGACCTATGTTCTGAAGGCCAACAAGTACCACAAGCTTACGATTGGCAGTGGGGCTACC
GTGAGAAGTTCGCAGAAGCGGGCATCACAGGTATTCTTGGTGCTGGCTTCGATCCAGGTGTGGTATCAATCTTTGCTGCA
TACGCGGTTAAGCACTTGTTCGATGAGATTGACTCCATTGACGTAATGGACGTGAATGCTGGCGACCACGGTAAGAAGTT
TGCGACAAACTTTGACCCAGAAACCAACATGCTTGAGATCCAAGGCGATTCTTTCTACTGGGAAAATGAAGAGTGGAAAC
AAGTACCTTGTCACTCTCGTATGCTTGAGTTTGAATTCCCGAACTGTGGTTCTCACAAAGTTTACTCAATGGCGCACGAT
GAAGTTCGTTCAATGAAAGAGTTCATCCCAGCTAAGCGTATCGAATTCTGGATGGGCTTTGGTGATGCATACCTGAATTA
CTTCAACTGCATGCGTGATATCGGTCTTCTTAGCCCAGATCCGCTAACATTGCACGATGGCACTGTGGTTCAGCCTCTGC
ATGTTCTTAAAGCACTACTGCCAGATCCAACATCTCTAGCTCCGGGTTATACTGGTTTAACGTGTATCGGTACTTGGGTT
CAAGGTAAGAAAGACGGTAAAGAGCGCAGCGTATTCATCTACAATAACGCAGACCACGAAGTGGCTTACGAAGACGTAGA
GCACCAAGCAATCTCTTACACTACGGGTGTTCCAGCGATTACGGCTGCACTTCAGTTCTTCCGTGGCGAATGGGCTGATA
AAGGCGTGTTCAACATGGAACAGTTAAACCCAGACCCGTTCCTAGCAACAATGCCTGAAATCGGTCTAGATTGGCATGTT
CAAGAACTTGAAGCAGGCCAAGGTCTTCCTGTGATTCAAGAGCTGAAAAAATAA

Upstream 100 bases:

>100_bases
TCTTGAATCCGTGCTTAACGACATCAGATTTCAAATCTCTAATTAACAAAATTAAAACTTTAGCTATTGAGCTAGCAGAA
CAACAAGGGTAATTAAAACT

Downstream 100 bases:

>100_bases
GAACTGATTTCTTGTTTTGATTGCTAATTAAAGGGGACATGGATTGTTCCCTTTTCGATGATGATAGCCTTGAAGCTTTG
GTATCATTTATTTTGATTTT

Product: putative saccharopine dehydrogenase

Products: NA

Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAILQIGAGGVGWVVAHKAAQNNEVLGDITIASRTIAKCEKIIESIKAKNNLKDSTKKLEARSVDADDVDALVALIKEVQ
PDLVINAGPPWVNMAIMEACYQSKVSYLDTSVAVDLCSEGQQVPQAYDWQWGYREKFAEAGITGILGAGFDPGVVSIFAA
YAVKHLFDEIDSIDVMDVNAGDHGKKFATNFDPETNMLEIQGDSFYWENEEWKQVPCHSRMLEFEFPNCGSHKVYSMAHD
EVRSMKEFIPAKRIEFWMGFGDAYLNYFNCMRDIGLLSPDPLTLHDGTVVQPLHVLKALLPDPTSLAPGYTGLTCIGTWV
QGKKDGKERSVFIYNNADHEVAYEDVEHQAISYTTGVPAITAALQFFRGEWADKGVFNMEQLNPDPFLATMPEIGLDWHV
QELEAGQGLPVIQELKK

Sequences:

>Translated_417_residues
MAILQIGAGGVGWVVAHKAAQNNEVLGDITIASRTIAKCEKIIESIKAKNNLKDSTKKLEARSVDADDVDALVALIKEVQ
PDLVINAGPPWVNMAIMEACYQSKVSYLDTSVAVDLCSEGQQVPQAYDWQWGYREKFAEAGITGILGAGFDPGVVSIFAA
YAVKHLFDEIDSIDVMDVNAGDHGKKFATNFDPETNMLEIQGDSFYWENEEWKQVPCHSRMLEFEFPNCGSHKVYSMAHD
EVRSMKEFIPAKRIEFWMGFGDAYLNYFNCMRDIGLLSPDPLTLHDGTVVQPLHVLKALLPDPTSLAPGYTGLTCIGTWV
QGKKDGKERSVFIYNNADHEVAYEDVEHQAISYTTGVPAITAALQFFRGEWADKGVFNMEQLNPDPFLATMPEIGLDWHV
QELEAGQGLPVIQELKK
>Mature_416_residues
AILQIGAGGVGWVVAHKAAQNNEVLGDITIASRTIAKCEKIIESIKAKNNLKDSTKKLEARSVDADDVDALVALIKEVQP
DLVINAGPPWVNMAIMEACYQSKVSYLDTSVAVDLCSEGQQVPQAYDWQWGYREKFAEAGITGILGAGFDPGVVSIFAAY
AVKHLFDEIDSIDVMDVNAGDHGKKFATNFDPETNMLEIQGDSFYWENEEWKQVPCHSRMLEFEFPNCGSHKVYSMAHDE
VRSMKEFIPAKRIEFWMGFGDAYLNYFNCMRDIGLLSPDPLTLHDGTVVQPLHVLKALLPDPTSLAPGYTGLTCIGTWVQ
GKKDGKERSVFIYNNADHEVAYEDVEHQAISYTTGVPAITAALQFFRGEWADKGVFNMEQLNPDPFLATMPEIGLDWHVQ
ELEAGQGLPVIQELKK

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46273; Mature: 46142

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILQIGAGGVGWVVAHKAAQNNEVLGDITIASRTIAKCEKIIESIKAKNNLKDSTKKLE
CEEEEECCCCEEHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARSVDADDVDALVALIKEVQPDLVINAGPPWVNMAIMEACYQSKVSYLDTSVAVDLCSEG
HCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQVPQAYDWQWGYREKFAEAGITGILGAGFDPGVVSIFAAYAVKHLFDEIDSIDVMDVNA
CCCCCCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC
GDHGKKFATNFDPETNMLEIQGDSFYWENEEWKQVPCHSRMLEFEFPNCGSHKVYSMAHD
CCCCCCCCCCCCCCCCEEEEECCEEEECCCCHHCCCHHHCEEEEECCCCCCCCHHHHHHH
EVRSMKEFIPAKRIEFWMGFGDAYLNYFNCMRDIGLLSPDPLTLHDGTVVQPLHVLKALL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHC
PDPTSLAPGYTGLTCIGTWVQGKKDGKERSVFIYNNADHEVAYEDVEHQAISYTTGVPAI
CCCCCCCCCCCCHHEEEHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCCHHH
TAALQFFRGEWADKGVFNMEQLNPDPFLATMPEIGLDWHVQELEAGQGLPVIQELKK
HHHHHHHHCCCCCCCCCCHHHCCCCCCEEECCCCCCCEEHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure 
AILQIGAGGVGWVVAHKAAQNNEVLGDITIASRTIAKCEKIIESIKAKNNLKDSTKKLE
EEEEECCCCEEHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARSVDADDVDALVALIKEVQPDLVINAGPPWVNMAIMEACYQSKVSYLDTSVAVDLCSEG
HCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQVPQAYDWQWGYREKFAEAGITGILGAGFDPGVVSIFAAYAVKHLFDEIDSIDVMDVNA
CCCCCCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC
GDHGKKFATNFDPETNMLEIQGDSFYWENEEWKQVPCHSRMLEFEFPNCGSHKVYSMAHD
CCCCCCCCCCCCCCCCEEEEECCEEEECCCCHHCCCHHHCEEEEECCCCCCCCHHHHHHH
EVRSMKEFIPAKRIEFWMGFGDAYLNYFNCMRDIGLLSPDPLTLHDGTVVQPLHVLKALL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHC
PDPTSLAPGYTGLTCIGTWVQGKKDGKERSVFIYNNADHEVAYEDVEHQAISYTTGVPAI
CCCCCCCCCCCCHHEEEHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCCHHH
TAALQFFRGEWADKGVFNMEQLNPDPFLATMPEIGLDWHVQELEAGQGLPVIQELKK
HHHHHHHHCCCCCCCCCCHHHCCCCCCEEECCCCCCCEEHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA