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The map label for this gene is 218709932

Identifier: 218709932

GI number: 218709932

Start: 2090249

End: 2091400

Strand: Reverse

Name: 218709932

Synonym: VS_1945

Alternate gene names: NA

Gene position: 2091400-2090249 (Counterclockwise)

Preceding gene: 218709933

Following gene: 218709929

Centisome position: 63.39

GC content: 46.18

Gene sequence:

>1152_bases
GTGTTTACAAAAATGACGTTTAAGAAAGAAGAACTAAAAACCCCATATTTCATGATCAACGAAGACAAGTTGATTGCGAA
CTTAGAAAAAGCGAAGCAACTGAAAGAGATTTCAGGTGTGAAGTTGGTATTGGCCCTGAAGTGCTTCTCGACATGGGGTG
TGTTTGACATCATCAAGCCTTACCTCGATGGCACGACAAGCTCTGGTCCATACGAAGTAAAACTTGGCCACGAAACCTTT
GGTGGTGAGACGCACGCTTACAGTGTGGGTTACAGCGAAGATGACGTGAGGGAAGTTGCGGATATCTGCGACAAGATGAT
CTTCAACTCTCAAAGCCAACTTGCTGCTTACCGACACATCGTTGAAGGTAAGGCTTCGCTGGGTTTACGTTTAAATCCGG
GTGTGAGCTACGCAGGACAAGATCTGGCAAACCCAGCGCGTCAATTCTCTCGCTTGGGCGTACAAGCTGATCACATCAAG
CCAGAGCTCTTCGATGAGATCAATGGTGTGATGTTCCACATGAACTGTGAGAACAAAGACGTCGATGCATTTATCGGCCT
GCTTGATTCAATCTCAGAACAGTTTGGCGAGCACTTAGATAAGTTGGACTGGGTGAGCATGGGCGGTGGTGTGTTCTTCA
CATGGCCGGGTTATGACATCGAAAAACTCGGTCTTGCGCTAAAAGCCTTCTCTGAAAAGCACGGTGTGCAGATGTATCTT
GAACCGGGTGAAGCCATCATCACTAAAACAACCGACCTAGTTGTGACAGTGGTCGATATTGTTGAGAACGTGAAGAAAAC
AGCGATTGTGGATTCAGCGACTGAGGCACATCGCCTTGATACGCTTATCTATAATGAACCAGCATCGGTATTAGAAGCGT
CTGAAAATGGTAGTCATGACTATGTGATTGGCTCATGTTCATGCTTGGCTGGCGACCAGTTCTGCGAAGTGAGTTTTGAT
GAGCCGCTGAACATTGGTCAAAAGCTGCATCTGTTGGACAGTGCTGGTTACACTATGGTGAAATTGAACTGGTTCAACGG
CCTTAAAATGCCTTCAATCTACTGCGAGCGCAGCAATGGCGACGTTCAAAAGCTGAATGAGTTTGGCTATGAAGACTTTA
AACGTTCTCTGTCACAGTGGTCAGTTAAGTAA

Upstream 100 bases:

>100_bases
TTATTTTGATTTTGTAACTCACTGCGCTCGGACAGGACAAAATCAAAATAAATCACACCAAAATTGTTAATTTACCTTTC
CATCTATAGATGCTGCTTGA

Downstream 100 bases:

>100_bases
CTGAGTCATAAGCTTCAGAACAATAAAAAGAGCAGCCGGTGAGCTGCTCTTTTTGTTTTTAGATAACTGTTACCAGAGAA
AAGAGTATGGATAGAAGTGA

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFTKMTFKKEELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPYEVKLGHETF
GGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIK
PELFDEINGVMFHMNCENKDVDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYL
EPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLAGDQFCEVSFD
EPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGYEDFKRSLSQWSVK

Sequences:

>Translated_383_residues
MFTKMTFKKEELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPYEVKLGHETF
GGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIK
PELFDEINGVMFHMNCENKDVDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYL
EPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLAGDQFCEVSFD
EPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGYEDFKRSLSQWSVK
>Mature_383_residues
MFTKMTFKKEELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPYEVKLGHETF
GGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIK
PELFDEINGVMFHMNCENKDVDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYL
EPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLAGDQFCEVSFD
EPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGYEDFKRSLSQWSVK

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42746; Mature: 42746

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKMTFKKEELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKP
CCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHH
YLDGTTSSGPYEVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHI
HHCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIKPELFDEINGVMFHMNCENKD
HCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHCCCCEEEEEECCCCC
VDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYL
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
EPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHD
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCCCC
YVIGSCSCLAGDQFCEVSFDEPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNG
EEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCC
DVQKLNEFGYEDFKRSLSQWSVK
CHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MFTKMTFKKEELKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKP
CCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHH
YLDGTTSSGPYEVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHI
HHCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VEGKASLGLRLNPGVSYAGQDLANPARQFSRLGVQADHIKPELFDEINGVMFHMNCENKD
HCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHCCCCEEEEEECCCCC
VDAFIGLLDSISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYL
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
EPGEAIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHD
ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHCCCCCCCCC
YVIGSCSCLAGDQFCEVSFDEPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNG
EEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCC
DVQKLNEFGYEDFKRSLSQWSVK
CHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA