| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709910
Identifier: 218709910
GI number: 218709910
Start: 2067616
End: 2068875
Strand: Reverse
Name: 218709910
Synonym: VS_1923
Alternate gene names: NA
Gene position: 2068875-2067616 (Counterclockwise)
Preceding gene: 218709911
Following gene: 218709909
Centisome position: 62.71
GC content: 44.6
Gene sequence:
>1260_bases ATGACCATTAAATCTTTAGTGACAAAAGCCGTAACTTCGTCACTCATTTTTGCCTCTGCTTCTTCTTTTGCAGCAGTAAC TCAAGATCAAGTTGTAGAACATTACGCCGATATTGCTCATGCAGTGTTTGCAGATTCAGTAATTACAGCAAAAGCGTTGA ACTCTTCTATTGATACCTTCTTAGCTTCTCCTTCTGCTGGCAATTTCGAACAAGTAAAGCAAGCTTGGCTAGACTCTCGT GTACCTTACCAACAGTCTGAAGTATTTCGCTTTGGTAACGTTGTTGTAGATGATTGGGAAGGCCAATTAAATGCATGGCC GCTAGATGAAGGCCTTATCGATTACGTTTCGACTGATTACCAATATGAACTTGGTAACGAAGGCGCTAGCGCAAACATCG TTGCAAATAAGACTTTCCAAATTGGTCAGACAACAGTAGACGCAACTAACATTACTCCAGAGCTAATTGCAGACCTGAAC GAGATCGGTGGTTCTGAAGCGAACGTAGCGTCTGGCTACCACGCGATTGAATTCCTACTTTGGGGCCAAGATTTAAACGG TACTAACAGCGGTGCAGGTGAGCGTGCTTACACTGATTTCGTTGTTGGTGCTGAGTGTACTAATGGTAACTGTGACCGTC GTGGCGCATACCTAAAAGCATCAGCTGAACTACTTATCCAAGACCTAGAGTGGATGGAAAAGCAGTGGGCTGAAGGCGAA AAAGGCAACTACCGTCAAGAGCTTCTTTCTGAATCTAGCGAGAACGGTCTACGTAAAATGCTATTTGGTATGGGCTCACT ATCTCTAGGTGAACTAGCGGGTGAGCGTATGAAAGTTGCACTAGAAGCAAACTCTACTGAAGACGAGCATGATTGTTTCT CTGATAACACGCATAACTCTCACTACTACAACGAGCAAGGTATCTACAACGTATACACTGGCTTGTACAAGCGTGAAGAT GGTTCTCTACTTTCAGGTCCTAGCCTGTTTGACCTCGTTGAGCAAAAAGACGAGCAAGCGGCGAAAGAGATTCAAAAGCA GTTTGACCTAGCACGTGCGCAAGTTGGTCAACTTGTTGTGTCAGCAGAGAAAAATAACCAGCACTTCGATCAGCTAATTG CTGCTGACAATGCTGCGGGTAACGCATTAGTAAACAAAACTATTGTTGCGCTAGTGTCTCAAACCGCTGCAATCGAGCGT GCTGCTGGTGTTATTGGCATTGATAGCCTAAACCCAGACACAGCGGATCACGAGTTCTAA
Upstream 100 bases:
>100_bases AATAAAATTGTAAGTTTGTATTATTCAAATCTGTAGTGTAAATGATAATGGTTTGCACTATTACTACGAATAATAATTCA AAGCTCAACAAGGATGCTTC
Downstream 100 bases:
>100_bases GAACCCGAGCGAACACAAATGTAAGGGCTCTTATTGAGCCCTTAATTGTTTGTTATTCAAAAAAAGTTACTCCCTAATAA AAACTAAAATCAAAAACACA
Product: putative iron-regulated protein A
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTIKSLVTKAVTSSLIFASASSFAAVTQDQVVEHYADIAHAVFADSVITAKALNSSIDTFLASPSAGNFEQVKQAWLDSR VPYQQSEVFRFGNVVVDDWEGQLNAWPLDEGLIDYVSTDYQYELGNEGASANIVANKTFQIGQTTVDATNITPELIADLN EIGGSEANVASGYHAIEFLLWGQDLNGTNSGAGERAYTDFVVGAECTNGNCDRRGAYLKASAELLIQDLEWMEKQWAEGE KGNYRQELLSESSENGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGLYKRED GSLLSGPSLFDLVEQKDEQAAKEIQKQFDLARAQVGQLVVSAEKNNQHFDQLIAADNAAGNALVNKTIVALVSQTAAIER AAGVIGIDSLNPDTADHEF
Sequences:
>Translated_419_residues MTIKSLVTKAVTSSLIFASASSFAAVTQDQVVEHYADIAHAVFADSVITAKALNSSIDTFLASPSAGNFEQVKQAWLDSR VPYQQSEVFRFGNVVVDDWEGQLNAWPLDEGLIDYVSTDYQYELGNEGASANIVANKTFQIGQTTVDATNITPELIADLN EIGGSEANVASGYHAIEFLLWGQDLNGTNSGAGERAYTDFVVGAECTNGNCDRRGAYLKASAELLIQDLEWMEKQWAEGE KGNYRQELLSESSENGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGLYKRED GSLLSGPSLFDLVEQKDEQAAKEIQKQFDLARAQVGQLVVSAEKNNQHFDQLIAADNAAGNALVNKTIVALVSQTAAIER AAGVIGIDSLNPDTADHEF >Mature_418_residues TIKSLVTKAVTSSLIFASASSFAAVTQDQVVEHYADIAHAVFADSVITAKALNSSIDTFLASPSAGNFEQVKQAWLDSRV PYQQSEVFRFGNVVVDDWEGQLNAWPLDEGLIDYVSTDYQYELGNEGASANIVANKTFQIGQTTVDATNITPELIADLNE IGGSEANVASGYHAIEFLLWGQDLNGTNSGAGERAYTDFVVGAECTNGNCDRRGAYLKASAELLIQDLEWMEKQWAEGEK GNYRQELLSESSENGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNSHYYNEQGIYNVYTGLYKREDG SLLSGPSLFDLVEQKDEQAAKEIQKQFDLARAQVGQLVVSAEKNNQHFDQLIAADNAAGNALVNKTIVALVSQTAAIERA AGVIGIDSLNPDTADHEF
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45588; Mature: 45456
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKSLVTKAVTSSLIFASASSFAAVTQDQVVEHYADIAHAVFADSVITAKALNSSIDTF CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASPSAGNFEQVKQAWLDSRVPYQQSEVFRFGNVVVDDWEGQLNAWPLDEGLIDYVSTDY CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHCCCC QYELGNEGASANIVANKTFQIGQTTVDATNITPELIADLNEIGGSEANVASGYHAIEFLL EEECCCCCCCCEEEECCEEECCCEEECCCCCCHHHHHHHHHHCCCCCCHHCCHHEEEEEE WGQDLNGTNSGAGERAYTDFVVGAECTNGNCDRRGAYLKASAELLIQDLEWMEKQWAEGE ECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KGNYRQELLSESSENGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNS CCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCC HYYNEQGIYNVYTGLYKREDGSLLSGPSLFDLVEQKDEQAAKEIQKQFDLARAQVGQLVV CCCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SAEKNNQHFDQLIAADNAAGNALVNKTIVALVSQTAAIERAAGVIGIDSLNPDTADHEF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC >Mature Secondary Structure TIKSLVTKAVTSSLIFASASSFAAVTQDQVVEHYADIAHAVFADSVITAKALNSSIDTF CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASPSAGNFEQVKQAWLDSRVPYQQSEVFRFGNVVVDDWEGQLNAWPLDEGLIDYVSTDY CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHCCCC QYELGNEGASANIVANKTFQIGQTTVDATNITPELIADLNEIGGSEANVASGYHAIEFLL EEECCCCCCCCEEEECCEEECCCEEECCCCCCHHHHHHHHHHCCCCCCHHCCHHEEEEEE WGQDLNGTNSGAGERAYTDFVVGAECTNGNCDRRGAYLKASAELLIQDLEWMEKQWAEGE ECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KGNYRQELLSESSENGLRKMLFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDNTHNS CCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCC HYYNEQGIYNVYTGLYKREDGSLLSGPSLFDLVEQKDEQAAKEIQKQFDLARAQVGQLVV CCCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE SAEKNNQHFDQLIAADNAAGNALVNKTIVALVSQTAAIERAAGVIGIDSLNPDTADHEF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA