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The map label for this gene is 218709901

Identifier: 218709901

GI number: 218709901

Start: 2057497

End: 2058597

Strand: Reverse

Name: 218709901

Synonym: VS_1914

Alternate gene names: NA

Gene position: 2058597-2057497 (Counterclockwise)

Preceding gene: 218709902

Following gene: 218709900

Centisome position: 62.39

GC content: 46.41

Gene sequence:

>1101_bases
GTGAATATGAGTCTCATTTCTAACTCCCTCACACGAGTTTTTAAAAACGTTGCAGTTACTGCAGCGGCTTGTTTAGCTTT
GGTCGCTACTGGTGCAACTGCTGCTGATAAGGTTTATCGCTTGAAGCTTGCTGAAACATGGGGACCAAACTTCCCTGTAT
TCGGTGACGCGACGAAGAACATGGCTGCGATGGCTGAGAAAATGTCGAACGGTCGACTGCAAATCAGAATCGATTCTGCG
AACAAGCACAAAGCACCGCTTGGCGTTTTTGACATGGTTAAGTCTGGTCAATACGACATGGGGCACTCAGGCTCCTACTA
CTGGAAAGGTAAAGTTCCAAACACGCTTTACTTCACTTCTATGCCTTTCGGTATGACGCCAGCTGAACAATATGCGTGGT
TCTATCACGGTGGTGGTATGGAATTGATGGAGCAGGTTTACTCTCCACATAATTTGATGTCGTTCCCAGGTGGTAATACG
GATATCCAGATGGGCGGTTGGTTTCAAAAAGAGATCAACAGTGTGGAAGACTTACAAGGTCTGAAAATGCGTATCCCTGG
CTTTGCTGGTGAGATTCTAGCGGAGCTAGGCGCTAAACCTACCAATATTGCCCCAGGTGAGCTTTACACGTCTCTAGAGC
GTCGCACAATCGATGCACTAGAGTGGGTAGGTCCATCACTTGATCTGCGTATGGGCTTCCACAAGATCGCACCTTACTAC
TACACAGGTTGGCATGAGCCGGGTTCAGAGCTTCAATTCCTAGTGAACAAGCGTACATGGAACAAGCTTCCTGAAGACCT
ACAAGAAATCTTGCGTGTTGCAATGCGTACAGCGGCTTACGACATGTACACACAAGCAACGCACGAAAGTGGCAAGAACT
GGGTTTCAATGAAAACAGAATACCCAGACGTACAAGTTAAAGATTTCCCACCAGAGGTTATGTCTGCACTGAAAGAAGCG
AACGATCGCCTACTTGCTAAGCACGCTGAGAAAGATGCATTGGCAAAAGAGATTCAAGCTTCACAAGCAAGCTACCTAGA
GCAAGTACGTTCATGGACAGATATTTCACACAGAGCTTATTTAAATAGCCAAGCGAAATAA

Upstream 100 bases:

>100_bases
CGTGCGTGCTCTCCCTGATATCTTGTTGCTACATCACGGTGCACTCTTATGTTGAATCATAAAAAATGCTCATAGAAAGA
GTGTTAACCCAACAAAGGAC

Downstream 100 bases:

>100_bases
TCGACAGTTTTTGAACTGAAGCTAAATGAACCCAAAGCTATTCTTGTTAGGTAACTAAGAGTGACTAAGCGGCGGGTTCA
TATTAACCATAACAATTAAG

Product: family 7 extracellular solute-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Transporter Dctp Subunit Containing Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNMSLISNSLTRVFKNVAVTAAACLALVATGATAADKVYRLKLAETWGPNFPVFGDATKNMAAMAEKMSNGRLQIRIDSA
NKHKAPLGVFDMVKSGQYDMGHSGSYYWKGKVPNTLYFTSMPFGMTPAEQYAWFYHGGGMELMEQVYSPHNLMSFPGGNT
DIQMGGWFQKEINSVEDLQGLKMRIPGFAGEILAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYY
YTGWHEPGSELQFLVNKRTWNKLPEDLQEILRVAMRTAAYDMYTQATHESGKNWVSMKTEYPDVQVKDFPPEVMSALKEA
NDRLLAKHAEKDALAKEIQASQASYLEQVRSWTDISHRAYLNSQAK

Sequences:

>Translated_366_residues
MNMSLISNSLTRVFKNVAVTAAACLALVATGATAADKVYRLKLAETWGPNFPVFGDATKNMAAMAEKMSNGRLQIRIDSA
NKHKAPLGVFDMVKSGQYDMGHSGSYYWKGKVPNTLYFTSMPFGMTPAEQYAWFYHGGGMELMEQVYSPHNLMSFPGGNT
DIQMGGWFQKEINSVEDLQGLKMRIPGFAGEILAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYY
YTGWHEPGSELQFLVNKRTWNKLPEDLQEILRVAMRTAAYDMYTQATHESGKNWVSMKTEYPDVQVKDFPPEVMSALKEA
NDRLLAKHAEKDALAKEIQASQASYLEQVRSWTDISHRAYLNSQAK
>Mature_366_residues
MNMSLISNSLTRVFKNVAVTAAACLALVATGATAADKVYRLKLAETWGPNFPVFGDATKNMAAMAEKMSNGRLQIRIDSA
NKHKAPLGVFDMVKSGQYDMGHSGSYYWKGKVPNTLYFTSMPFGMTPAEQYAWFYHGGGMELMEQVYSPHNLMSFPGGNT
DIQMGGWFQKEINSVEDLQGLKMRIPGFAGEILAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYY
YTGWHEPGSELQFLVNKRTWNKLPEDLQEILRVAMRTAAYDMYTQATHESGKNWVSMKTEYPDVQVKDFPPEVMSALKEA
NDRLLAKHAEKDALAKEIQASQASYLEQVRSWTDISHRAYLNSQAK

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41024; Mature: 41024

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSLISNSLTRVFKNVAVTAAACLALVATGATAADKVYRLKLAETWGPNFPVFGDATKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEHHHCCCCCCCCCCCHHH
MAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSGSYYWKGKVPNTLYFTS
HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEC
MPFGMTPAEQYAWFYHGGGMELMEQVYSPHNLMSFPGGNTDIQMGGWFQKEINSVEDLQG
CCCCCCHHHHCEEEEECCCHHHHHHHCCCCCEEECCCCCCEEEECCCHHHHHCHHHHHCC
LKMRIPGFAGEILAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYY
CEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE
YTGWHEPGSELQFLVNKRTWNKLPEDLQEILRVAMRTAAYDMYTQATHESGKNWVSMKTE
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
YPDVQVKDFPPEVMSALKEANDRLLAKHAEKDALAKEIQASQASYLEQVRSWTDISHRAY
CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSQAK
HCCCCC
>Mature Secondary Structure
MNMSLISNSLTRVFKNVAVTAAACLALVATGATAADKVYRLKLAETWGPNFPVFGDATKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEHHHCCCCCCCCCCCHHH
MAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSGSYYWKGKVPNTLYFTS
HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEC
MPFGMTPAEQYAWFYHGGGMELMEQVYSPHNLMSFPGGNTDIQMGGWFQKEINSVEDLQG
CCCCCCHHHHCEEEEECCCHHHHHHHCCCCCEEECCCCCCEEEECCCHHHHHCHHHHHCC
LKMRIPGFAGEILAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYY
CEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE
YTGWHEPGSELQFLVNKRTWNKLPEDLQEILRVAMRTAAYDMYTQATHESGKNWVSMKTE
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
YPDVQVKDFPPEVMSALKEANDRLLAKHAEKDALAKEIQASQASYLEQVRSWTDISHRAY
CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNSQAK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA