Click here to switch to the map view.

The map label for this gene is 218709879

Identifier: 218709879

GI number: 218709879

Start: 2035393

End: 2035683

Strand: Reverse

Name: 218709879

Synonym: VS_1892

Alternate gene names: NA

Gene position: 2035683-2035393 (Counterclockwise)

Preceding gene: 218709880

Following gene: 218709876

Centisome position: 61.7

GC content: 36.77

Gene sequence:

>291_bases
ATGATTGAAGTGAATTATTTAGTTCAAGTCGTGAGTATTCCTGATGATCTCATTGAAGCATCACAGAAAGCGGGTTCAGA
CTTGTATATGACCTATAAGCTTTATCAGCTGCTTGTACAGTCTAATCTTTTGTGGCGAGTTTGGTATATCGATGAATTTG
GCAAAGTTTGGCTTGAAGTCAATTTGGTTAATGATGTGGGTGACCCAGAATTTCATACGATAGCTTTAGATCAAGGTACT
TATCTGAAAATAGACACTGAATGCTATGAAGTGTTGGATGAGTTGAAATAG

Upstream 100 bases:

>100_bases
AGAGCATCGTAGAAGGGTGTTAGAGATAGGTAGTGAAAGGGTGCCTATCACTGGGTTTTGTTGTAACTTGGTTTTTAGTG
ATTTAATAATTTGAGGCTTT

Downstream 100 bases:

>100_bases
ACGAAAAAGCCGATAGTTCGGCTTTATCATTGGCTCTCGATAGGTCTATTTGTAAGCTAGCTTCGCTTGGTTATTTTTAC
ATTAAACCCAACAGGAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MIEVNYLVQVVSIPDDLIEASQKAGSDLYMTYKLYQLLVQSNLLWRVWYIDEFGKVWLEVNLVNDVGDPEFHTIALDQGT
YLKIDTECYEVLDELK

Sequences:

>Translated_96_residues
MIEVNYLVQVVSIPDDLIEASQKAGSDLYMTYKLYQLLVQSNLLWRVWYIDEFGKVWLEVNLVNDVGDPEFHTIALDQGT
YLKIDTECYEVLDELK
>Mature_96_residues
MIEVNYLVQVVSIPDDLIEASQKAGSDLYMTYKLYQLLVQSNLLWRVWYIDEFGKVWLEVNLVNDVGDPEFHTIALDQGT
YLKIDTECYEVLDELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11221; Mature: 11221

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVNYLVQVVSIPDDLIEASQKAGSDLYMTYKLYQLLVQSNLLWRVWYIDEFGKVWLEV
CEEHHHEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECCCEEEEEE
NLVNDVGDPEFHTIALDQGTYLKIDTECYEVLDELK
EEECCCCCCCEEEEEECCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MIEVNYLVQVVSIPDDLIEASQKAGSDLYMTYKLYQLLVQSNLLWRVWYIDEFGKVWLEV
CEEHHHEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECCCEEEEEE
NLVNDVGDPEFHTIALDQGTYLKIDTECYEVLDELK
EEECCCCCCCEEEEEECCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA