| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709864
Identifier: 218709864
GI number: 218709864
Start: 2023127
End: 2023669
Strand: Reverse
Name: 218709864
Synonym: VS_1877
Alternate gene names: NA
Gene position: 2023669-2023127 (Counterclockwise)
Preceding gene: 218709865
Following gene: 218709863
Centisome position: 61.34
GC content: 37.94
Gene sequence:
>543_bases TTGGAAAACGTATTCATCTTTGGTTCTAGTATTCTTAGTGTAATTAGTCTTGCGATTGTTGGCTGGTTTACGAAGAGTTA TTTTCCTAGCTATATGAAAGAAAAAGGAAAAAATACTGCCACAAAAGAAGATATTGAAGATATTACTAAAATTGTAGAGT GGGTTAAGCAACGTAGCGCTGCTGAACTTGAAGAGCTGAAGTCAGCACTAAACGAGCAAGACAAACTTCTCGAAAAAAGA AGAGAGGTGTATGAGGACATTGTTGAGTCTTTACGTCTTTTTATTACTGGTCACCCTGCAACCGATGAGCAAAAGTTTCA TTTTTACTCTGCGTGTTCTAAGGCTTGGCTATGGGCACCCGACCCAGTGTTACTAGCGTTGAATGAGTTCTTAGATATCC AAGTTCAATTGGCTCAAAGGGATGGTAGTGTAGATCAGCAGACAGCTAAAGCTAAATATGAAAAGGTAGTATTAGAAATG CGTAAAGATGTTGGTTTTTCAACAACTACGGAAAGAAAATACAGATTCGTCACGTTCAATTGA
Upstream 100 bases:
>100_bases TTTTGGTTTGAATTAAGTTTAGTGTTTACGGCGTTCAATTTAAGTGTCGTGGTAGCGTGGCTCACACCTTAATTGGGCGT TAGCACTCAAGGAGTAAAAA
Downstream 100 bases:
>100_bases GCAGAGTGCTAACAAACAATGTAAGAGTGATTCAGCACGTTTGGCATTTTTGGTTTGGATTGAGTTTTGTGTTTACGATG GTCAAATTAAGTGTCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM RKDVGFSTTTERKYRFVTFN
Sequences:
>Translated_180_residues MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM RKDVGFSTTTERKYRFVTFN >Mature_180_residues MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM RKDVGFSTTTERKYRFVTFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20860; Mature: 20860
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AELEELKSALNEQDKLLEKRREVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAP HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC DPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEMRKDVGFSTTTERKYRFVTFN CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC >Mature Secondary Structure MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AELEELKSALNEQDKLLEKRREVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAP HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC DPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEMRKDVGFSTTTERKYRFVTFN CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA