Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709818

Identifier: 218709818

GI number: 218709818

Start: 1970615

End: 1971535

Strand: Direct

Name: 218709818

Synonym: VS_1830

Alternate gene names: NA

Gene position: 1970615-1971535 (Clockwise)

Preceding gene: 218709816

Following gene: 218709819

Centisome position: 59.73

GC content: 42.56

Gene sequence:

>921_bases
ATGAATCATTTATCATTTTTCTGGCTACCACAAAATAAAGCTCTTCTCCTTAAGGGCCTAGAATCCGAGTTTGCCCAACT
TGTTGGACATTCCATCTCAGCGGGAAAAATAACTCTTCCTCCGATTCCTGAGGTTGTACTTAAAATTCAAAAGCTTTGTA
CTCTTGAACCAACAGGCGTCGCCGAAGTTGCCGAGTGCTTACTTGAAGACCCAGGGCTGACAGCAATCGTGATCAGAGTT
GCTAACTCAGTTGTCTTCAACAGACGCAATATTACTTGTGTCGATGTTATGACGGCCGTATCGCGTCTTGGTATCTTGAG
AGTGCGTGACATTGTCACGGCCCAGGCTATTGAACAACTTAAACATTCCGTCAATTTGAATAAAGAGTGCAACGAGCTAT
TGGTTCAGAGCGCTTCTGTATCAAAAGAACTCGCCGCAACTATGGTGTTAGTCACTAACCTATTTAAAGAACTATCCCCT
ACCGAATACCGTTATCTAGAACATGAAAAGTCACTACTTGTTGGGTTACTTGCAGACATTGGCTTGTTCTGTTTGGTTAG
TGAATATCACCTCTACCTAGACAACGGGAACTATTTAGATCACGACATCGCACTGCAAATATTCCAAGGCCAATGTTCAG
CAACCAGTAAGTTGGTCCTTAGACGCTGGGGTTTCGACAGCGACTTTATCGATGTGTGCAGCAACACCATTAATAATCAC
GAAGAGCGCGAGGTGTCTTATCTTGATATTGCGCGAATAGCTAACCACCTACTGATGTTTAGAAACAAGGATGAGAATAT
TGATGAGCACGAAGTAGAACTAAACGTGACAGGAGCGGAAGTACTTTATAAATTAAGCAACTTGAGCAAACAGGATTTTA
ATGCAAAGCTAAGTGACGTGATCAATACTAGCGGCTTCTAA

Upstream 100 bases:

>100_bases
ACCCCCGTTCAAGTTATCAAAGCTTATGTGGTTCGATGAGTATTGCCTCGCAGCATCGCGGCTTGTAAAATGGTACGACA
TACATGTTCTTACTCTTAAT

Downstream 100 bases:

>100_bases
GTTACTGTTAAATTGCTAGTAAATGCAATATGAAGTCAATGCAATGGGGAAAGCATGTTTACAGGGATGATCTTTATATT
TGCGCCACTCGTCGTGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase HDOD; Hdod Domain Family Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNHLSFFWLPQNKALLLKGLESEFAQLVGHSISAGKITLPPIPEVVLKIQKLCTLEPTGVAEVAECLLEDPGLTAIVIRV
ANSVVFNRRNITCVDVMTAVSRLGILRVRDIVTAQAIEQLKHSVNLNKECNELLVQSASVSKELAATMVLVTNLFKELSP
TEYRYLEHEKSLLVGLLADIGLFCLVSEYHLYLDNGNYLDHDIALQIFQGQCSATSKLVLRRWGFDSDFIDVCSNTINNH
EEREVSYLDIARIANHLLMFRNKDENIDEHEVELNVTGAEVLYKLSNLSKQDFNAKLSDVINTSGF

Sequences:

>Translated_306_residues
MNHLSFFWLPQNKALLLKGLESEFAQLVGHSISAGKITLPPIPEVVLKIQKLCTLEPTGVAEVAECLLEDPGLTAIVIRV
ANSVVFNRRNITCVDVMTAVSRLGILRVRDIVTAQAIEQLKHSVNLNKECNELLVQSASVSKELAATMVLVTNLFKELSP
TEYRYLEHEKSLLVGLLADIGLFCLVSEYHLYLDNGNYLDHDIALQIFQGQCSATSKLVLRRWGFDSDFIDVCSNTINNH
EEREVSYLDIARIANHLLMFRNKDENIDEHEVELNVTGAEVLYKLSNLSKQDFNAKLSDVINTSGF
>Mature_306_residues
MNHLSFFWLPQNKALLLKGLESEFAQLVGHSISAGKITLPPIPEVVLKIQKLCTLEPTGVAEVAECLLEDPGLTAIVIRV
ANSVVFNRRNITCVDVMTAVSRLGILRVRDIVTAQAIEQLKHSVNLNKECNELLVQSASVSKELAATMVLVTNLFKELSP
TEYRYLEHEKSLLVGLLADIGLFCLVSEYHLYLDNGNYLDHDIALQIFQGQCSATSKLVLRRWGFDSDFIDVCSNTINNH
EEREVSYLDIARIANHLLMFRNKDENIDEHEVELNVTGAEVLYKLSNLSKQDFNAKLSDVINTSGF

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34272; Mature: 34272

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLSFFWLPQNKALLLKGLESEFAQLVGHSISAGKITLPPIPEVVLKIQKLCTLEPTGV
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCH
AEVAECLLEDPGLTAIVIRVANSVVFNRRNITCVDVMTAVSRLGILRVRDIVTAQAIEQL
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHSVNLNKECNELLVQSASVSKELAATMVLVTNLFKELSPTEYRYLEHEKSLLVGLLADI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLFCLVSEYHLYLDNGNYLDHDIALQIFQGQCSATSKLVLRRWGFDSDFIDVCSNTINNH
HHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
EEREVSYLDIARIANHLLMFRNKDENIDEHEVELNVTGAEVLYKLSNLSKQDFNAKLSDV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHCCHHHCCHHHHHH
INTSGF
HCCCCC
>Mature Secondary Structure
MNHLSFFWLPQNKALLLKGLESEFAQLVGHSISAGKITLPPIPEVVLKIQKLCTLEPTGV
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCH
AEVAECLLEDPGLTAIVIRVANSVVFNRRNITCVDVMTAVSRLGILRVRDIVTAQAIEQL
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHSVNLNKECNELLVQSASVSKELAATMVLVTNLFKELSPTEYRYLEHEKSLLVGLLADI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLFCLVSEYHLYLDNGNYLDHDIALQIFQGQCSATSKLVLRRWGFDSDFIDVCSNTINNH
HHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
EEREVSYLDIARIANHLLMFRNKDENIDEHEVELNVTGAEVLYKLSNLSKQDFNAKLSDV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHCCHHHCCHHHHHH
INTSGF
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA