| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709809
Identifier: 218709809
GI number: 218709809
Start: 1960002
End: 1961891
Strand: Direct
Name: 218709809
Synonym: VS_1821
Alternate gene names: NA
Gene position: 1960002-1961891 (Clockwise)
Preceding gene: 218709807
Following gene: 218709810
Centisome position: 59.41
GC content: 44.92
Gene sequence:
>1890_bases ATGGATGCTGAGTTATTAGAGATTCAAAACTTTCTGGCACAATACCCCCCTTTCACAGAACTCCCAGAGGAGATGTTGGC GAAAGTGACCAGTAGCGTCGAAATTTCTTATTACCGCCAAGATACCCCTATCATTCACTTTGGTGATCAGATTAACGACC TTTACATTGTTCGAAGCGGCGAAGTAGAAGTCTATCGTCGTAAAGGTGAGCTCTATAACCGGCTGGATGAGGGACACTTA TTTGGCCAAATGGGGCTACTCACCAACAATAAAGTTCGCTTCCCGGTAAAAGCAACAGAAGACACCCTACTCTACTGTAT CCCTGAACCTATTTTCCAAGAACTCTACGACAACTATGATTCATTCGCTGACTTTGTCGAAGTAGAAGATAATGCGCGAC TGCGTCAGGCTAACTCAGACAGCAACGACGCTAACGATCTAACCACGTCAAAGGTAAAGACGCTGCTGACTAGCGAAGCG CCAATGATCGAAAAAACACGAACCATCCAACAAGCTGCTACCATGATGGCACAAGATAATGTTTCATCTTTGCTGATCAT CGACCCGGATATTGTTGAAGATGATGAAGACGATTCGACGCCCGTTATTGGCATCATTACCGACCGTGATCTGTGTACCC GAGTTTTAGCAGAAGGACTCGATCCATCGGATGAAGTATCAAGTGTAATGACAGCAGAGGTTATCTCGCTCGATCATAAT GCCTATGTCTACGAAGCCATGATGACCATGCTTCGCTACAACGTGCATCACCTACCAGTACTAAAAGATAAGAAGCCTAT TGGTATTATTGAAGCGACCGATATTGTACGTTACGAATCTCAAAACTCGCTGTTATTGGTAAGCAGCATCTTCCAACAGC AAAGCATCGAAGATCTTAAAGTCCTTTCTGAGCAAGTAAAAGACAGCTTTGTGCGCTTGGTTAACGAAGACGCCAACGCC CACATGGTGGGTACCGCAATGTCGGTAATTGGCCGTAGCTTTAAACAACGAATTATTGAACTAGCCGAAGATAAACTCGG TAAAGCGCCGATCCCTTATTGTTTCCTCGCGCTCGGCTCAATGGGGCGTGATGAGCAGCTGCTCGTTACTGACCAAGATA ACGCCATTATTCTTGATGATACCTACGATGAGAAAAAGCACGGTAAGTACTTTGAAGAGCTGTCGACCTTCATTTGTGAT GGCTTGGACCAATGTGGCTATGTGTACTGTACCGGTGACATCATGGCCACTAACCCAACTTGGCGTATGACACGTCGACA ATGGGAAGAATGCTTCGCCGATTGGATTGATGATCCAAACCCGAAAGCACTGCTGAACGCCTCTATCTTCTTTGATTTAG ATGGTGTTTATGGCCGCTTAAAATGGGCAGAACAGTTAAATAGCTTTATTGTAAGACGTGCGCGTAAGAACAACCGTTTC TTGGCGTGTCTTGCTCGCAACGCACTCAACCGAACACCGCCTCTGGGTTTCTTTAAAGATTTCGTAATGGAGAAAGATGG TCGTCATAACAACTCGATCAACCTTAAACGTCGTGGTACCGCACCACTTGCCGATCTAATCCGTGTTCACTCTTTAGCAG TCGCATCTCGCTCTAAGAACTCATTCGAACGTTTAGATGACATTATCGACGCAGGTATTTTGCCAAAAGGTCGAGCTCAA GACTTGAAAGATGCGATGGAATTTATCTCTTTAGTTCGTATTCGCCACCAAGCACACGATGTCGACAACAACATCGAACC GGATAACAACATCGAACCAGAGAACCTTTCTGACTTCGAGCGACGTAATCTAAAGGATGCATTCCAAATATTAAGCAATG CACAGAACTTTCTTAAGTTCCGTTATCAAGCCAGCAATAAGTTTAAGTAG
Upstream 100 bases:
>100_bases CTAAGACTTTAAAAAGGTTTTAGCTCACAGATTGATTTGTGACGGCAAAATATTATCAAATGTTGTACCATGAAATCATA CAAACCAATGGATGATCATT
Downstream 100 bases:
>100_bases GCGCTATGAACAAACTATTCAGATCCCCAGCGGTTGATTGGCCATTTAAGTTTGCTCAGAAGCTCGAACGAGCGAGAGAT GAACGCTTGAAGCAATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK
Sequences:
>Translated_629_residues MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK >Mature_629_residues MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 71849; Mature: 71849
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSG CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEECC EVEVYRRKGELYNRLDEGHLFGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYD CEEEHHHHHHHHHHHHCCCCEEEECEEECCEEEEEEECCCCCEEEECCCHHHHHHHHCHH SFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAQDN HHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC VSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN CCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLK HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHEEECCCCCEEHHHHHHHHHCHHHHH VLSEQVKDSFVRLVNEDANAHMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC MGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICDGLDQCGYVYCTGDIMATNPT CCCCCEEEEECCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEECCCC WRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKN EEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCH SFERLDDIIDAGILPKGRAQDLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH RRNLKDAFQILSNAQNFLKFRYQASNKFK HCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSG CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEECC EVEVYRRKGELYNRLDEGHLFGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYD CEEEHHHHHHHHHHHHCCCCEEEECEEECCEEEEEEECCCCCEEEECCCHHHHHHHHCHH SFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAQDN HHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC VSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN CCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLK HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHEEECCCCCEEHHHHHHHHHCHHHHH VLSEQVKDSFVRLVNEDANAHMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC MGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICDGLDQCGYVYCTGDIMATNPT CCCCCEEEEECCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEECCCC WRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKN EEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCH SFERLDDIIDAGILPKGRAQDLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH RRNLKDAFQILSNAQNFLKFRYQASNKFK HCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]