Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709809

Identifier: 218709809

GI number: 218709809

Start: 1960002

End: 1961891

Strand: Direct

Name: 218709809

Synonym: VS_1821

Alternate gene names: NA

Gene position: 1960002-1961891 (Clockwise)

Preceding gene: 218709807

Following gene: 218709810

Centisome position: 59.41

GC content: 44.92

Gene sequence:

>1890_bases
ATGGATGCTGAGTTATTAGAGATTCAAAACTTTCTGGCACAATACCCCCCTTTCACAGAACTCCCAGAGGAGATGTTGGC
GAAAGTGACCAGTAGCGTCGAAATTTCTTATTACCGCCAAGATACCCCTATCATTCACTTTGGTGATCAGATTAACGACC
TTTACATTGTTCGAAGCGGCGAAGTAGAAGTCTATCGTCGTAAAGGTGAGCTCTATAACCGGCTGGATGAGGGACACTTA
TTTGGCCAAATGGGGCTACTCACCAACAATAAAGTTCGCTTCCCGGTAAAAGCAACAGAAGACACCCTACTCTACTGTAT
CCCTGAACCTATTTTCCAAGAACTCTACGACAACTATGATTCATTCGCTGACTTTGTCGAAGTAGAAGATAATGCGCGAC
TGCGTCAGGCTAACTCAGACAGCAACGACGCTAACGATCTAACCACGTCAAAGGTAAAGACGCTGCTGACTAGCGAAGCG
CCAATGATCGAAAAAACACGAACCATCCAACAAGCTGCTACCATGATGGCACAAGATAATGTTTCATCTTTGCTGATCAT
CGACCCGGATATTGTTGAAGATGATGAAGACGATTCGACGCCCGTTATTGGCATCATTACCGACCGTGATCTGTGTACCC
GAGTTTTAGCAGAAGGACTCGATCCATCGGATGAAGTATCAAGTGTAATGACAGCAGAGGTTATCTCGCTCGATCATAAT
GCCTATGTCTACGAAGCCATGATGACCATGCTTCGCTACAACGTGCATCACCTACCAGTACTAAAAGATAAGAAGCCTAT
TGGTATTATTGAAGCGACCGATATTGTACGTTACGAATCTCAAAACTCGCTGTTATTGGTAAGCAGCATCTTCCAACAGC
AAAGCATCGAAGATCTTAAAGTCCTTTCTGAGCAAGTAAAAGACAGCTTTGTGCGCTTGGTTAACGAAGACGCCAACGCC
CACATGGTGGGTACCGCAATGTCGGTAATTGGCCGTAGCTTTAAACAACGAATTATTGAACTAGCCGAAGATAAACTCGG
TAAAGCGCCGATCCCTTATTGTTTCCTCGCGCTCGGCTCAATGGGGCGTGATGAGCAGCTGCTCGTTACTGACCAAGATA
ACGCCATTATTCTTGATGATACCTACGATGAGAAAAAGCACGGTAAGTACTTTGAAGAGCTGTCGACCTTCATTTGTGAT
GGCTTGGACCAATGTGGCTATGTGTACTGTACCGGTGACATCATGGCCACTAACCCAACTTGGCGTATGACACGTCGACA
ATGGGAAGAATGCTTCGCCGATTGGATTGATGATCCAAACCCGAAAGCACTGCTGAACGCCTCTATCTTCTTTGATTTAG
ATGGTGTTTATGGCCGCTTAAAATGGGCAGAACAGTTAAATAGCTTTATTGTAAGACGTGCGCGTAAGAACAACCGTTTC
TTGGCGTGTCTTGCTCGCAACGCACTCAACCGAACACCGCCTCTGGGTTTCTTTAAAGATTTCGTAATGGAGAAAGATGG
TCGTCATAACAACTCGATCAACCTTAAACGTCGTGGTACCGCACCACTTGCCGATCTAATCCGTGTTCACTCTTTAGCAG
TCGCATCTCGCTCTAAGAACTCATTCGAACGTTTAGATGACATTATCGACGCAGGTATTTTGCCAAAAGGTCGAGCTCAA
GACTTGAAAGATGCGATGGAATTTATCTCTTTAGTTCGTATTCGCCACCAAGCACACGATGTCGACAACAACATCGAACC
GGATAACAACATCGAACCAGAGAACCTTTCTGACTTCGAGCGACGTAATCTAAAGGATGCATTCCAAATATTAAGCAATG
CACAGAACTTTCTTAAGTTCCGTTATCAAGCCAGCAATAAGTTTAAGTAG

Upstream 100 bases:

>100_bases
CTAAGACTTTAAAAAGGTTTTAGCTCACAGATTGATTTGTGACGGCAAAATATTATCAAATGTTGTACCATGAAATCATA
CAAACCAATGGATGATCATT

Downstream 100 bases:

>100_bases
GCGCTATGAACAAACTATTCAGATCCCCAGCGGTTGATTGGCCATTTAAGTTTGCTCAGAAGCTCGAACGAGCGAGAGAT
GAACGCTTGAAGCAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL
FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA
PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN
AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA
HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD
GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF
LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ
DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK

Sequences:

>Translated_629_residues
MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL
FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA
PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN
AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA
HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD
GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF
LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ
DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK
>Mature_629_residues
MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSGEVEVYRRKGELYNRLDEGHL
FGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYDSFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEA
PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN
AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLKVLSEQVKDSFVRLVNEDANA
HMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGSMGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICD
GLDQCGYVYCTGDIMATNPTWRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF
LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKNSFERLDDIIDAGILPKGRAQ
DLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFERRNLKDAFQILSNAQNFLKFRYQASNKFK

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 71849; Mature: 71849

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSG
CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEECC
EVEVYRRKGELYNRLDEGHLFGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYD
CEEEHHHHHHHHHHHHCCCCEEEECEEECCEEEEEEECCCCCEEEECCCHHHHHHHHCHH
SFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAQDN
HHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
VSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN
CCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHEEECCCCCEEHHHHHHHHHCHHHHH
VLSEQVKDSFVRLVNEDANAHMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
MGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICDGLDQCGYVYCTGDIMATNPT
CCCCCEEEEECCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEECCCC
WRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE
LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKN
EEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCH
SFERLDDIIDAGILPKGRAQDLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
RRNLKDAFQILSNAQNFLKFRYQASNKFK
HCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDAELLEIQNFLAQYPPFTELPEEMLAKVTSSVEISYYRQDTPIIHFGDQINDLYIVRSG
CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEEECC
EVEVYRRKGELYNRLDEGHLFGQMGLLTNNKVRFPVKATEDTLLYCIPEPIFQELYDNYD
CEEEHHHHHHHHHHHHCCCCEEEECEEECCEEEEEEECCCCCEEEECCCHHHHHHHHCHH
SFADFVEVEDNARLRQANSDSNDANDLTTSKVKTLLTSEAPMIEKTRTIQQAATMMAQDN
HHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
VSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGLDPSDEVSSVMTAEVISLDHN
CCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
AYVYEAMMTMLRYNVHHLPVLKDKKPIGIIEATDIVRYESQNSLLLVSSIFQQQSIEDLK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHEEECCCCCEEHHHHHHHHHCHHHHH
VLSEQVKDSFVRLVNEDANAHMVGTAMSVIGRSFKQRIIELAEDKLGKAPIPYCFLALGS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
MGRDEQLLVTDQDNAIILDDTYDEKKHGKYFEELSTFICDGLDQCGYVYCTGDIMATNPT
CCCCCEEEEECCCCEEEEECCCCCHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEECCCC
WRMTRRQWEECFADWIDDPNPKALLNASIFFDLDGVYGRLKWAEQLNSFIVRRARKNNRF
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCE
LACLARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHSLAVASRSKN
EEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCH
SFERLDDIIDAGILPKGRAQDLKDAMEFISLVRIRHQAHDVDNNIEPDNNIEPENLSDFE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
RRNLKDAFQILSNAQNFLKFRYQASNKFK
HCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]