Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709798

Identifier: 218709798

GI number: 218709798

Start: 1943100

End: 1944476

Strand: Direct

Name: 218709798

Synonym: VS_1810

Alternate gene names: NA

Gene position: 1943100-1944476 (Clockwise)

Preceding gene: 218709797

Following gene: 218709803

Centisome position: 58.89

GC content: 41.54

Gene sequence:

>1377_bases
ATGAAAACAAGCATTTTATCTGCAGCTCTACTAATCACTTTAACCGGATGTGGCGGAGGAGGCTCATCGACTCCCGCGAA
AAAACCAACAGTTAAGCCAACGCAAAAGCCAGTGGTATTTATCTCTAAATGTTCGCAACCCTTACAAGGGGATACAGCCT
TAACCTTCAAGATTAAGGGTACAATAGCGAGTGTCAATGGCGTTGCATGTAGTGGTAGCCCCAAAGCATTTGACGATATG
ATCAAAGCTCACCCGAATACAAAAACGCTGAACTTCATCGATATGGGTGGCTCTATGAATGATGATGCCAACATTCAACT
AGCGTACAAAGTAAGAGCGAAAAAATTAGACACGTACATTAGCTCTATTGGACATGTCGCTTCGGGGGGAACTGACCTTT
TCGCTGCGGGTGTGAAAAGAACGATTGAACCAGGTGCTCGATTAGGCGTTCACTCATGGGCACAAGGGTCTTTACAAGGG
GCTTCATTGCCTGTTGGTCATAGTGAGCATAAACCCTACATTGATTATTATAAAAAGATGGGATTACCAGATCCGAGCGG
CTTCTACTGGTTTACACTGAAAGCTGCTCCGGCTCAAGGAATGCATTATATGACTCCTGCTGAAGTATCTAAGTATGGTT
TGGCGTCTGTAATGACGGGTGTTACAAAAGACCTACGAGCAAATTACACTCCTAAAAACAGCCTTTTGAACAACAACCTG
TTAGACGTTGTTAGTGATAGTCTGAAAGCTGTAGCCGTTGAAAACCACGTAAGAAGCAGTGTCTATGTGCTCGACCATGT
CTCCACACTTCTATTTAAGCATTTCAATGTATCAAATAGAGACGAGTTAATCACTTACATAAAGCTCAATGGGAAACTCG
ACCCCGTAACGAAATCTTACGTCTTCGCAGCCACGTCAGACAAACCTGCGACGATCTATAACTCAAACAAAGATGTAATT
CATTCATCTTACAGCTCCAATAGTAAGTATAAGATCCAAGCTAAACCTTTAATTGAAACTGGCTTGACGATACAAGACTA
TGGCGTCGAAGACACAACAACAAGTGTTCAAGTCGTATTAAATAGAAGTGATGTCAAAGTTACCGTAGGAAGTGAAGAGT
TTTCTCTAACCAAAGCCTCTTCAACAAATAAAATAAACCATTGCAAAATGGATAGTGCAGCGAATTCATCAGGTCACTTA
GTAACGATTGCAAACTGTACAGAAAGCCGCCTTCAAGGTGACTTGGTACAATTGGTGAATTACAAGCGAACGACAAAAAC
ACCCTTAATTGGTGGAACTCCCTCAGTAAAGAACTCCATTACTAAGACTTCGAACTTTGAATTCAATGCTAAACAAAGTA
CGCTAATTACTAAGTAA

Upstream 100 bases:

>100_bases
TTATGTAATGAACACCTGACAAAGTCATACAGTATTGATGTCCTGTATAAATTATTCTTCTTACTAACTAATTTGTGAAT
ATAAATTTTTAGGGACCCCA

Downstream 100 bases:

>100_bases
TTTTACACATTGCAAAAAGAAGCCCTACTTAACACAGTAGGGCTTCATCTTTATTTCTTCTGCTTAAGTTTCATTTAAGC
TGTCCAGACTAAATTAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM
IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG
ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL
LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI
HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL
VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK

Sequences:

>Translated_458_residues
MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM
IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG
ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL
LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI
HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL
VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK
>Mature_458_residues
MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM
IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG
ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL
LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI
HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL
VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49249; Mature: 49249

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKG
CCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEE
TIASVNGVACSGSPKAFDDMIKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYI
EEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHH
SSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQGASLPVGHSEHKPYIDYYKKM
HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
GLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL
CCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH
LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSY
HHHHHHHHHEEHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCEE
VFAATSDKPATIYNSNKDVIHSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVL
EEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHCCCEEEECCCCCCCCEEEEEE
NRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHLVTIANCTESRLQGDLVQLVN
ECCCEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHC
YKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK
CCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCEECCC
>Mature Secondary Structure
MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKG
CCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEE
TIASVNGVACSGSPKAFDDMIKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYI
EEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHH
SSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQGASLPVGHSEHKPYIDYYKKM
HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
GLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL
CCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH
LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSY
HHHHHHHHHEEHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCEE
VFAATSDKPATIYNSNKDVIHSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVL
EEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHCCCEEEECCCCCCCCEEEEEE
NRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHLVTIANCTESRLQGDLVQLVN
ECCCEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHC
YKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK
CCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA