Click here to switch to the map view.

The map label for this gene is ybaR [H]

Identifier: 218709796

GI number: 218709796

Start: 1939168

End: 1940658

Strand: Reverse

Name: ybaR [H]

Synonym: VS_1808

Alternate gene names: 218709796

Gene position: 1940658-1939168 (Counterclockwise)

Preceding gene: 218709799

Following gene: 218709794

Centisome position: 58.82

GC content: 45.2

Gene sequence:

>1491_bases
ATGCTTAATTATTTAAAAAAACACTGGTTATCAAACGTTAAAGGAGATTCATTATCTGGGATTGTGGTTGCACTCGCATT
GATCCCTGAAGCCATCGCATTTTCAATTATTGCAGGCGTTGACCCTAAAGTAGGGCTCTATGCCTCGTTCTGTATTTGTG
TCGTCACTGCTTTGGTTGGCAGTCGTCCGGGAATGATTTCCGGTGCAACAGGCGCTATGGCGCTATTAATGGTCACCTTG
GTGAGAGAGTACGGACTAGAATATCTACTCGCTGCTTCATCTTTAGCTGGCGTCATTCAAATCGCAGCCGGGTATCTTAA
GCTTGGTAACCTAATGAATTTCGTTTCCAAATCGGTGATTACTGGATTTGTTAACGCGCTCGCGATTCTCATTTTCATGG
CCCAGCTTCCTGAGTTGATCAACGTTCATTCAAGTGTTTACGTGTTAGTCGCTTTGGGTTTGGCGATCATCTACTTGCTT
CCATATTTTCCCAAGTTTGGTCGTGCAATACCTTCTCCATTGGTCGCTATTGTTGCCCTGACAATCATTAGTTTGTTGTT
CGGATTAGATGTGAGAACGATTGGCGATATGGGCAAGCTTCCGGATTCACTGCCGGTATTCTTGATTCCTAATATCCCAT
TCACGTTCGATACGCTTGCAACCATCCTGCCATATTCTATCGCTCTATCTCTGGTTGGCTTACTGGAATCTTTGATGACA
GCGACCATAGTCGATGATCTGACCGATACTGAAAGCAATAAAAACAATGAGTGTAAAGGGCAGGGAGTAGCGAACATCGT
TGCCTCACTATTTGGTGGTATGGCGGGGTGTGCGATGATCGGTCAGTCGATCATTAACATCAAATCAGGTGGCTTAACCC
GATTATCCAGTATGATCGCTGGGGTTGTTTTGTTGCTAATGGTGGTGTTTGTTTCTGATTGGTTGAAGCTGATACCGATG
GCGGCTTTAGTCTCTGTGATGATCATGGTATCAATCGGCACGTTTTCATGGCGTTCTGTTGTTGAACTTAAAGATCACAC
GCTCCCTACTAATGTGACGATGCTAGCGACCGTAGCGGTGGTGGTGTTTACGCACAATCTCGCGATAGGTGTTGCAGTTG
GCGTGGTGTTATCGGCTCTGTTTTATGCGCATGCCAGCAAGTCGATGGTCTTTATATCTGATGAAGTGGTGACTAACGAA
CTGCACACCACCCATCGAGTAAAAGGCCATGTCTTTTTTGCTTCTTCAGATGCGTTTGTCGATCTATTTGACTATGACAA
GGCCACGTCTTTAGTGACGATCGATATATCGGATGCATCGTTCCTAGATAACACGTCGGTTGAGGCGCTTGATAAGGTCG
TGTTTAAGTTCCGAAAAAAGGGTGCTTATGTAGAGGTCGCAGGAATGGATACCGTGAGTGCGAATCTGATATTCAAGCAC
GCGATGTACCACAAGCATAAAGATTTAACCGCGGTTTCCATTACGCACTAA

Upstream 100 bases:

>100_bases
TACACCCGCACTTTTCGAGCGCTCGCTCATTCAAGAAAAACAGTCGATCAAATTATGTCTCAACAAGGCAGGACTGGCTG
TACAAGTAAAAGAGAATTAC

Downstream 100 bases:

>100_bases
TCGTGGTTTAAGGTGATCTTAAAATCTTAAAATCTTAAAGCCCAAACTAGACATTGTTATGAAGATAAAGCGCTCATCTT
TGAGCGCTTTTTTGTTGATG

Product: putative sulfate permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLNYLKKHWLSNVKGDSLSGIVVALALIPEAIAFSIIAGVDPKVGLYASFCICVVTALVGSRPGMISGATGAMALLMVTL
VREYGLEYLLAASSLAGVIQIAAGYLKLGNLMNFVSKSVITGFVNALAILIFMAQLPELINVHSSVYVLVALGLAIIYLL
PYFPKFGRAIPSPLVAIVALTIISLLFGLDVRTIGDMGKLPDSLPVFLIPNIPFTFDTLATILPYSIALSLVGLLESLMT
ATIVDDLTDTESNKNNECKGQGVANIVASLFGGMAGCAMIGQSIINIKSGGLTRLSSMIAGVVLLLMVVFVSDWLKLIPM
AALVSVMIMVSIGTFSWRSVVELKDHTLPTNVTMLATVAVVVFTHNLAIGVAVGVVLSALFYAHASKSMVFISDEVVTNE
LHTTHRVKGHVFFASSDAFVDLFDYDKATSLVTIDISDASFLDNTSVEALDKVVFKFRKKGAYVEVAGMDTVSANLIFKH
AMYHKHKDLTAVSITH

Sequences:

>Translated_496_residues
MLNYLKKHWLSNVKGDSLSGIVVALALIPEAIAFSIIAGVDPKVGLYASFCICVVTALVGSRPGMISGATGAMALLMVTL
VREYGLEYLLAASSLAGVIQIAAGYLKLGNLMNFVSKSVITGFVNALAILIFMAQLPELINVHSSVYVLVALGLAIIYLL
PYFPKFGRAIPSPLVAIVALTIISLLFGLDVRTIGDMGKLPDSLPVFLIPNIPFTFDTLATILPYSIALSLVGLLESLMT
ATIVDDLTDTESNKNNECKGQGVANIVASLFGGMAGCAMIGQSIINIKSGGLTRLSSMIAGVVLLLMVVFVSDWLKLIPM
AALVSVMIMVSIGTFSWRSVVELKDHTLPTNVTMLATVAVVVFTHNLAIGVAVGVVLSALFYAHASKSMVFISDEVVTNE
LHTTHRVKGHVFFASSDAFVDLFDYDKATSLVTIDISDASFLDNTSVEALDKVVFKFRKKGAYVEVAGMDTVSANLIFKH
AMYHKHKDLTAVSITH
>Mature_496_residues
MLNYLKKHWLSNVKGDSLSGIVVALALIPEAIAFSIIAGVDPKVGLYASFCICVVTALVGSRPGMISGATGAMALLMVTL
VREYGLEYLLAASSLAGVIQIAAGYLKLGNLMNFVSKSVITGFVNALAILIFMAQLPELINVHSSVYVLVALGLAIIYLL
PYFPKFGRAIPSPLVAIVALTIISLLFGLDVRTIGDMGKLPDSLPVFLIPNIPFTFDTLATILPYSIALSLVGLLESLMT
ATIVDDLTDTESNKNNECKGQGVANIVASLFGGMAGCAMIGQSIINIKSGGLTRLSSMIAGVVLLLMVVFVSDWLKLIPM
AALVSVMIMVSIGTFSWRSVVELKDHTLPTNVTMLATVAVVVFTHNLAIGVAVGVVLSALFYAHASKSMVFISDEVVTNE
LHTTHRVKGHVFFASSDAFVDLFDYDKATSLVTIDISDASFLDNTSVEALDKVVFKFRKKGAYVEVAGMDTVSANLIFKH
AMYHKHKDLTAVSITH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=144, Percent_Identity=34.7222222222222, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI262206075, Length=144, Percent_Identity=34.7222222222222, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI262206069, Length=144, Percent_Identity=34.7222222222222, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI262206063, Length=144, Percent_Identity=34.7222222222222, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI45827800, Length=494, Percent_Identity=22.8744939271255, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI39752683, Length=494, Percent_Identity=22.8744939271255, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI45827802, Length=446, Percent_Identity=23.7668161434978, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4557535, Length=365, Percent_Identity=22.7397260273973, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI269784651, Length=367, Percent_Identity=24.5231607629428, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI100913030, Length=366, Percent_Identity=24.0437158469945, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI94721257, Length=493, Percent_Identity=21.2981744421907, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI94721255, Length=493, Percent_Identity=21.2981744421907, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI94721259, Length=493, Percent_Identity=21.2981744421907, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI94721253, Length=493, Percent_Identity=21.2981744421907, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI16418457, Length=388, Percent_Identity=23.9690721649485, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI301601599, Length=388, Percent_Identity=23.9690721649485, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081859, Length=515, Percent_Identity=26.4077669902913, Blast_Score=161, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI17566848, Length=547, Percent_Identity=24.8628884826325, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI86565215, Length=551, Percent_Identity=21.7785843920145, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551690, Length=437, Percent_Identity=21.0526315789474, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI86564196, Length=389, Percent_Identity=21.8508997429306, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6325260, Length=452, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323121, Length=395, Percent_Identity=22.7848101265823, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319771, Length=379, Percent_Identity=22.1635883905013, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85815873, Length=467, Percent_Identity=26.338329764454, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24649801, Length=568, Percent_Identity=23.2394366197183, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21358229, Length=528, Percent_Identity=24.8106060606061, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI19922482, Length=144, Percent_Identity=34.7222222222222, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24651449, Length=143, Percent_Identity=32.8671328671329, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21358633, Length=421, Percent_Identity=23.2779097387173, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355087, Length=142, Percent_Identity=26.056338028169, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24647160, Length=142, Percent_Identity=26.056338028169, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24663084, Length=138, Percent_Identity=29.7101449275362, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357695, Length=138, Percent_Identity=29.7101449275362, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 52930; Mature: 52930

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYLKKHWLSNVKGDSLSGIVVALALIPEAIAFSIIAGVDPKVGLYASFCICVVTALVG
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
SRPGMISGATGAMALLMVTLVREYGLEYLLAASSLAGVIQIAAGYLKLGNLMNFVSKSVI
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFMAQLPELINVHSSVYVLVALGLAIIYLLPYFPKFGRAIPSPLVAIVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
TIISLLFGLDVRTIGDMGKLPDSLPVFLIPNIPFTFDTLATILPYSIALSLVGLLESLMT
HHHHHHHCCCHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATIVDDLTDTESNKNNECKGQGVANIVASLFGGMAGCAMIGQSIINIKSGGLTRLSSMIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GVVLLLMVVFVSDWLKLIPMAALVSVMIMVSIGTFSWRSVVELKDHTLPTNVTMLATVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHH
VVFTHNLAIGVAVGVVLSALFYAHASKSMVFISDEVVTNELHTTHRVKGHVFFASSDAFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEEEEEEECCCCEE
DLFDYDKATSLVTIDISDASFLDNTSVEALDKVVFKFRKKGAYVEVAGMDTVSANLIFKH
EEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
AMYHKHKDLTAVSITH
HHHHHCCCCCEEEECC
>Mature Secondary Structure
MLNYLKKHWLSNVKGDSLSGIVVALALIPEAIAFSIIAGVDPKVGLYASFCICVVTALVG
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
SRPGMISGATGAMALLMVTLVREYGLEYLLAASSLAGVIQIAAGYLKLGNLMNFVSKSVI
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFMAQLPELINVHSSVYVLVALGLAIIYLLPYFPKFGRAIPSPLVAIVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
TIISLLFGLDVRTIGDMGKLPDSLPVFLIPNIPFTFDTLATILPYSIALSLVGLLESLMT
HHHHHHHCCCHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATIVDDLTDTESNKNNECKGQGVANIVASLFGGMAGCAMIGQSIINIKSGGLTRLSSMIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GVVLLLMVVFVSDWLKLIPMAALVSVMIMVSIGTFSWRSVVELKDHTLPTNVTMLATVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHH
VVFTHNLAIGVAVGVVLSALFYAHASKSMVFISDEVVTNELHTTHRVKGHVFFASSDAFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEEEEEEECCCCEE
DLFDYDKATSLVTIDISDASFLDNTSVEALDKVVFKFRKKGAYVEVAGMDTVSANLIFKH
EEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
AMYHKHKDLTAVSITH
HHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]