| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is tyrP [H]
Identifier: 218709793
GI number: 218709793
Start: 1934885
End: 1936039
Strand: Reverse
Name: tyrP [H]
Synonym: VS_1805
Alternate gene names: 218709793
Gene position: 1936039-1934885 (Counterclockwise)
Preceding gene: 218709794
Following gene: 218709789
Centisome position: 58.68
GC content: 45.97
Gene sequence:
>1155_bases ATGAATATTAAAATGATGGGTAGCTCCCTAATTATCGCTGGTACCGCTCTCGGTGCTGGTATGCTTGCGATCCCAATGGT ATTAGCTCAATTCGGATTGCTTTACGGCACACTGCTTATGGTACTGATCTGCTTCGGTACGACTTATGCAGCATTACTAC TTCTAGAAGCGACCATCAAAGCGGGTGGCGGTCTAGGATTAAACTCTATTGCCCGAAAAACCTTGGGCAAACAAGGGCAG TTGATTACCAACGGCCTACTTTACGCGTTATTGATTTGCCTATTGATGGCCTACATTCTGGGTGCGGGTGATTTGCTGAG TAAGTTACTGTCTAACTTAGGTGTAGACATTAGCGCAACGACGAGCCAAATCACGTTTACTTTACTTGCTGGTGCTGTAG TCGCAAGTGGCACCGGAGTGATTGATAAGCTCAACCGCGCATTGTTCTTTGTGATGCTAGCAAGCTTGTTTGCAACCATG GTGTTTTTGGCACCAAGTATGACGCAAGAAAACTTGATGCAGGTAACCAGCCACGACCACGTCGATCTAATCAAAACCAG TGCCATCCTGTTTACGAGCTTTGGCTTTATGGTTGTGATTCCAACCTTGGTTTCTTACAACCACGAAGCGACAGACAAAC AGCTGCGTAACATGGTTATTATCGGTTCTCTGATTCCATTAGTGTGCTACTTGTGCTGGTTGTTTGCTGTGGTTGGTAAC TTGAGTGAAGAGCAATTCAGAAGCTTTGAGAACGTATCAGATTTGATGGCGGCGTTTGAGGCTCAGTCTCCTTGGGTGGG TAACGTTCTGTCTACCTTCACGGGCTTGGCGTTGTTGACCTCTTTCTTTGGTGTGGCGATGGCGTTGTTCAACCAGAACA AAGATATGTTCAACCAAAATACAGCGGTAACGTACTGCATTAGCTTTATCTTGCCGTTAGCGGGTTCATTGCTTGCTGCA GACAAGTTCCTACAAGTGCTGAATTACGCAGGTATCATCTTGGTGTTCCTAGCGGTGTTTGTTCCTCTGGTGATGGTTCA CAAGCAGCGCTTCATGAAAGTTGCTGATGATAGATACCGAGCAGAAGGTGGCAGCGCAATGATGCTTTTCTCATTGTTGT TTGGTTGCTTCTTGCTTATCTCACAAGTGATCTAG
Upstream 100 bases:
>100_bases TTATTCGTTTTATAACTTTATTTCTATCTGAACTCCTTTGTCATCCGCTCGATGAACGAAGACTCACATCTATAAAAACT AAACAAATAAGTTAAAAACA
Downstream 100 bases:
>100_bases TTCTTTGGTCCATTATCTACGGTGCGAATCGAGCATCTTAGATATAAGTGACCGGAATTCAGATACAAAAAAAGGAACGC ATCGGCGTTCCTTTTTATTA
Product: Tyrosine-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNIKMMGSSLIIAGTALGAGMLAIPMVLAQFGLLYGTLLMVLICFGTTYAALLLLEATIKAGGGLGLNSIARKTLGKQGQ LITNGLLYALLICLLMAYILGAGDLLSKLLSNLGVDISATTSQITFTLLAGAVVASGTGVIDKLNRALFFVMLASLFATM VFLAPSMTQENLMQVTSHDHVDLIKTSAILFTSFGFMVVIPTLVSYNHEATDKQLRNMVIIGSLIPLVCYLCWLFAVVGN LSEEQFRSFENVSDLMAAFEAQSPWVGNVLSTFTGLALLTSFFGVAMALFNQNKDMFNQNTAVTYCISFILPLAGSLLAA DKFLQVLNYAGIILVFLAVFVPLVMVHKQRFMKVADDRYRAEGGSAMMLFSLLFGCFLLISQVI
Sequences:
>Translated_384_residues MNIKMMGSSLIIAGTALGAGMLAIPMVLAQFGLLYGTLLMVLICFGTTYAALLLLEATIKAGGGLGLNSIARKTLGKQGQ LITNGLLYALLICLLMAYILGAGDLLSKLLSNLGVDISATTSQITFTLLAGAVVASGTGVIDKLNRALFFVMLASLFATM VFLAPSMTQENLMQVTSHDHVDLIKTSAILFTSFGFMVVIPTLVSYNHEATDKQLRNMVIIGSLIPLVCYLCWLFAVVGN LSEEQFRSFENVSDLMAAFEAQSPWVGNVLSTFTGLALLTSFFGVAMALFNQNKDMFNQNTAVTYCISFILPLAGSLLAA DKFLQVLNYAGIILVFLAVFVPLVMVHKQRFMKVADDRYRAEGGSAMMLFSLLFGCFLLISQVI >Mature_384_residues MNIKMMGSSLIIAGTALGAGMLAIPMVLAQFGLLYGTLLMVLICFGTTYAALLLLEATIKAGGGLGLNSIARKTLGKQGQ LITNGLLYALLICLLMAYILGAGDLLSKLLSNLGVDISATTSQITFTLLAGAVVASGTGVIDKLNRALFFVMLASLFATM VFLAPSMTQENLMQVTSHDHVDLIKTSAILFTSFGFMVVIPTLVSYNHEATDKQLRNMVIIGSLIPLVCYLCWLFAVVGN LSEEQFRSFENVSDLMAAFEAQSPWVGNVLSTFTGLALLTSFFGVAMALFNQNKDMFNQNTAVTYCISFILPLAGSLLAA DKFLQVLNYAGIILVFLAVFVPLVMVHKQRFMKVADDRYRAEGGSAMMLFSLLFGCFLLISQVI
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=387, Percent_Identity=35.1421188630491, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1790145, Length=383, Percent_Identity=27.4151436031332, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789552, Length=370, Percent_Identity=25.1351351351351, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 41357; Mature: 41357
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKMMGSSLIIAGTALGAGMLAIPMVLAQFGLLYGTLLMVLICFGTTYAALLLLEATIK CCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGGLGLNSIARKTLGKQGQLITNGLLYALLICLLMAYILGAGDLLSKLLSNLGVDISAT CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TSQITFTLLAGAVVASGTGVIDKLNRALFFVMLASLFATMVFLAPSMTQENLMQVTSHDH HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VDLIKTSAILFTSFGFMVVIPTLVSYNHEATDKQLRNMVIIGSLIPLVCYLCWLFAVVGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSEEQFRSFENVSDLMAAFEAQSPWVGNVLSTFTGLALLTSFFGVAMALFNQNKDMFNQN CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TAVTYCISFILPLAGSLLAADKFLQVLNYAGIILVFLAVFVPLVMVHKQRFMKVADDRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGGSAMMLFSLLFGCFLLISQVI CCCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNIKMMGSSLIIAGTALGAGMLAIPMVLAQFGLLYGTLLMVLICFGTTYAALLLLEATIK CCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGGLGLNSIARKTLGKQGQLITNGLLYALLICLLMAYILGAGDLLSKLLSNLGVDISAT CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TSQITFTLLAGAVVASGTGVIDKLNRALFFVMLASLFATMVFLAPSMTQENLMQVTSHDH HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VDLIKTSAILFTSFGFMVVIPTLVSYNHEATDKQLRNMVIIGSLIPLVCYLCWLFAVVGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSEEQFRSFENVSDLMAAFEAQSPWVGNVLSTFTGLALLTSFFGVAMALFNQNKDMFNQN CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TAVTYCISFILPLAGSLLAADKFLQVLNYAGIILVFLAVFVPLVMVHKQRFMKVADDRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGGSAMMLFSLLFGCFLLISQVI CCCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]