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The map label for this gene is 218709772

Identifier: 218709772

GI number: 218709772

Start: 1909678

End: 1910208

Strand: Reverse

Name: 218709772

Synonym: VS_1784

Alternate gene names: NA

Gene position: 1910208-1909678 (Counterclockwise)

Preceding gene: 218709773

Following gene: 218709771

Centisome position: 57.9

GC content: 44.63

Gene sequence:

>531_bases
ATGAATCACAATCGAGTGGTATGTTTCGATTTGGAAATGTGCTGTTGGAGCGAAGACGGTGTGGGAACAACAGGCGAGAT
CATTGAAGTTGGTCTTGCTGAAATTGATCTAGCATCTGGCACTATCGTCAAGCGAGCACAATACTACGTTAAGCCAGAGA
AAGATGAAGTCTCTCTGTTCTGCGCCGAGCTAACGGGCATAACACCTCGTAAAATCGAAAAGCAAGGTCGTCCATTAGAA
TCTGTCATCAAGTCGATGATTAAGAACTTCGGTGGGCCAAAAAAAATTTATGCAGCGTGGGGACGTGACGACCTTATCTT
ACACAAAGAGTGTATTGAGAAAGGCATCGAACCTCCGTTCAGCGAGTTCTTGAATATCGCCACGCTTTATCGAGTTCAGA
ATCGATTGAAAGAAAAACGTATTGGTCACCGTGCTGCTCAAGAAGCGAAAAACATTGAGTGGGAAGGTCGTCAGCACTCT
GGTTATGTTGACGCTTATAACTTGGCAAAGCTTGCGCTGACTATGTTGTAA

Upstream 100 bases:

>100_bases
AATTGCAGGCTAAATGAGCACTTGATGCAACTAGGGTCGAGTTCTGTATTGGGCTCATGTACAATTTGACAAAATTTTTG
ACGAGAGAATTAGGCGACGT

Downstream 100 bases:

>100_bases
TCGTTTGTATTTCAGAGAGGCGCTTGGTTAAATACTGAAAGGTTAAACACTTAAAGTTAGCCTGAATCTTGTGAGTTATT
AAAATGAAGAGCCACCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Exonuclease; Exonuclease Superfamily Protein; Exonuclease KapD; Exonuclease Superfamily

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNHNRVVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEVSLFCAELTGITPRKIEKQGRPLE
SVIKSMIKNFGGPKKIYAAWGRDDLILHKECIEKGIEPPFSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHS
GYVDAYNLAKLALTML

Sequences:

>Translated_176_residues
MNHNRVVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEVSLFCAELTGITPRKIEKQGRPLE
SVIKSMIKNFGGPKKIYAAWGRDDLILHKECIEKGIEPPFSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHS
GYVDAYNLAKLALTML
>Mature_176_residues
MNHNRVVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEVSLFCAELTGITPRKIEKQGRPLE
SVIKSMIKNFGGPKKIYAAWGRDDLILHKECIEKGIEPPFSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHS
GYVDAYNLAKLALTML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24657520, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24657528, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573607, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221330522, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19943; Mature: 19943

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHNRVVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEVSLF
CCCCCEEEEECCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCHHHHH
CAELTGITPRKIEKQGRPLESVIKSMIKNFGGPKKIYAAWGRDDLILHKECIEKGIEPPF
HHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHCCCCCCH
SEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNHNRVVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEVSLF
CCCCCEEEEECCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCHHHHH
CAELTGITPRKIEKQGRPLESVIKSMIKNFGGPKKIYAAWGRDDLILHKECIEKGIEPPF
HHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHCCCCCCH
SEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA