Click here to switch to the map view.

The map label for this gene is 218709768

Identifier: 218709768

GI number: 218709768

Start: 1906681

End: 1907127

Strand: Reverse

Name: 218709768

Synonym: VS_1780

Alternate gene names: NA

Gene position: 1907127-1906681 (Counterclockwise)

Preceding gene: 218709769

Following gene: 218709764

Centisome position: 57.8

GC content: 41.61

Gene sequence:

>447_bases
GTGAGTGATATGAATCGTAAGTTTTGGATGCCTATCTTACTCACGTTTTTTGTGATTCTAAATGTAGGCTTAATTTCTGG
GCTCGCAACCAAAAGTACTTATAAATTTTCCGCAGAATACCCGATGGTAGGCTGGGAAAAAATATCACTTCGATTGGAAA
ATGGTCGAGTCAAAATGCAGTACATTGGTTACGATATCGATGGGAATATCGCTCAAACTAAGCAGATGTTTGGCGTGTTC
TTGCGCTGGGGGAATCATTACTACTTTTATCAATTGGATCAAGATCAGGCCCAAGATAAGCAGACATTTAATATCAAGCA
CTTATACATTCAACAAACACAAGGCAAGCGCAGTGTGTTGGTATCAAATCAGCGCGGCCTTTATGTCACTAAGAAGGGCA
CGCCGTTAGAGCTCAAAGGCATCATGCATGGCGACCGTTTACGTTGA

Upstream 100 bases:

>100_bases
AGAATATCCAAGCCGTCGCATTGATAAACGGGCGCTGGAAAGAGATGAGTCACCAGTTTAAATCTTTGTCTTGCGATGAC
GATAATGACGATGAGCGAGG

Downstream 100 bases:

>100_bases
TCCAGTCACTTAACGTGAGTATCGAGCCTTTGGTTAGCTTTTACCGATGACGTTCAGCTTAGTTTTGATAAAGTCACTGT
GGTCAACGTAGAGCAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSDMNRKFWMPILLTFFVILNVGLISGLATKSTYKFSAEYPMVGWEKISLRLENGRVKMQYIGYDIDGNIAQTKQMFGVF
LRWGNHYYFYQLDQDQAQDKQTFNIKHLYIQQTQGKRSVLVSNQRGLYVTKKGTPLELKGIMHGDRLR

Sequences:

>Translated_148_residues
MSDMNRKFWMPILLTFFVILNVGLISGLATKSTYKFSAEYPMVGWEKISLRLENGRVKMQYIGYDIDGNIAQTKQMFGVF
LRWGNHYYFYQLDQDQAQDKQTFNIKHLYIQQTQGKRSVLVSNQRGLYVTKKGTPLELKGIMHGDRLR
>Mature_147_residues
SDMNRKFWMPILLTFFVILNVGLISGLATKSTYKFSAEYPMVGWEKISLRLENGRVKMQYIGYDIDGNIAQTKQMFGVFL
RWGNHYYFYQLDQDQAQDKQTFNIKHLYIQQTQGKRSVLVSNQRGLYVTKKGTPLELKGIMHGDRLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17356; Mature: 17225

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMNRKFWMPILLTFFVILNVGLISGLATKSTYKFSAEYPMVGWEKISLRLENGRVKMQ
CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCEEEEE
YIGYDIDGNIAQTKQMFGVFLRWGNHYYFYQLDQDQAQDKQTFNIKHLYIQQTQGKRSVL
EEEEECCCCHHHHHHHHEEEEEECCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEE
VSNQRGLYVTKKGTPLELKGIMHGDRLR
EECCCCEEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SDMNRKFWMPILLTFFVILNVGLISGLATKSTYKFSAEYPMVGWEKISLRLENGRVKMQ
CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCEEEEE
YIGYDIDGNIAQTKQMFGVFLRWGNHYYFYQLDQDQAQDKQTFNIKHLYIQQTQGKRSVL
EEEEECCCCHHHHHHHHEEEEEECCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEE
VSNQRGLYVTKKGTPLELKGIMHGDRLR
EECCCCEEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA