| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709765
Identifier: 218709765
GI number: 218709765
Start: 1903553
End: 1904014
Strand: Direct
Name: 218709765
Synonym: VS_1777
Alternate gene names: NA
Gene position: 1903553-1904014 (Clockwise)
Preceding gene: 218709761
Following gene: 218709766
Centisome position: 57.7
GC content: 43.72
Gene sequence:
>462_bases GTGGAATATTCTCGGTTAAATGAAAGCATTGTGAAAGTCTCCGAATTACAAAACATTATAGATCACTTACCCCAAGATTC CGATCCGGATATTGTTATTGGTGAAGCGTGGTTGCCTGAGCGTTTGGTGAATACCAACCTAGACGGCGACATGCTATTTC TTGAGTTCGATAATGCCCCTGAAGACAATCAAGGGGATGAAGAAGGCCGTGGTTTTGTTGAACACGAAATTGGCATGATT CGTGAAAAACTAGAGCAAGTGTTAGACGACACATCCGATACTAAGACCAAAGCCGATGCCCTATTGGCAATATTTCTAAT GGGCCATGAACTTTCTAGCTCGGAAGTTATCGAACTCCTTGAAGCAGATGGTTCTGAAACACCTGAGTCTGAAATGATCG CGCCTGACATAACAGAGCCTGAAACGAACAAGCTCGAAACAAAACAACACCACGACGACTAG
Upstream 100 bases:
>100_bases TGTAATTACTCTTTGTAATAAATTTTGTGTTACTGAATAGACATTTATTAGCGATAACGGCTAACTAAATTTAGGTTTGA GCGGCATTGGCCGTTACAAT
Downstream 100 bases:
>100_bases CCACCAACGATTTTAGGTACCGTATTGAAACCCTCTACGACATCATCTCTTCCCCTGTTACTCGCCGGACCCATTTTAAG AAAAACGACTGCAACTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MEYSRLNESIVKVSELQNIIDHLPQDSDPDIVIGEAWLPERLVNTNLDGDMLFLEFDNAPEDNQGDEEGRGFVEHEIGMI REKLEQVLDDTSDTKTKADALLAIFLMGHELSSSEVIELLEADGSETPESEMIAPDITEPETNKLETKQHHDD
Sequences:
>Translated_153_residues MEYSRLNESIVKVSELQNIIDHLPQDSDPDIVIGEAWLPERLVNTNLDGDMLFLEFDNAPEDNQGDEEGRGFVEHEIGMI REKLEQVLDDTSDTKTKADALLAIFLMGHELSSSEVIELLEADGSETPESEMIAPDITEPETNKLETKQHHDD >Mature_153_residues MEYSRLNESIVKVSELQNIIDHLPQDSDPDIVIGEAWLPERLVNTNLDGDMLFLEFDNAPEDNQGDEEGRGFVEHEIGMI REKLEQVLDDTSDTKTKADALLAIFLMGHELSSSEVIELLEADGSETPESEMIAPDITEPETNKLETKQHHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17233; Mature: 17233
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSRLNESIVKVSELQNIIDHLPQDSDPDIVIGEAWLPERLVNTNLDGDMLFLEFDNAP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEECCCC EDNQGDEEGRGFVEHEIGMIREKLEQVLDDTSDTKTKADALLAIFLMGHELSSSEVIELL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH EADGSETPESEMIAPDITEPETNKLETKQHHDD HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYSRLNESIVKVSELQNIIDHLPQDSDPDIVIGEAWLPERLVNTNLDGDMLFLEFDNAP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEEECCCC EDNQGDEEGRGFVEHEIGMIREKLEQVLDDTSDTKTKADALLAIFLMGHELSSSEVIELL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH EADGSETPESEMIAPDITEPETNKLETKQHHDD HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA