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The map label for this gene is bkdR [H]

Identifier: 218709733

GI number: 218709733

Start: 1868468

End: 1868923

Strand: Direct

Name: bkdR [H]

Synonym: VS_1744

Alternate gene names: 218709733

Gene position: 1868468-1868923 (Clockwise)

Preceding gene: 218709731

Following gene: 218709734

Centisome position: 56.63

GC content: 48.03

Gene sequence:

>456_bases
ATGGACGAGATCGACAAGAAAATACTGGCTGAACTGCAAAGCAACGCTCGGCTGACTAATCAAGAGTTGGCCGACCGAGT
AGCACTGTCGCCCTCTCCTTGCTTACGCCGAGTTCGAGCATTAGAGAAACAAGGGATTATTCGCGGCTATCACGCCAGTG
TTGACCAAGAAGCGTGTGGCCTGCCAGTCAATGTGTTTGTGTTGGTGAAACTTGAAAAGCCGACAGAAGAGAACATGCGA
GACTTTGAACAGCACATCGAAGTGATTGATGAAGTGTTAGAGTGCTTTCTAATGACGGGCAATCACGACTACCTATTGCA
TGTAGTCAGCGAGTCGCTAAAAAGCTACGAGCAGTTTATCCGCAAGCAATTAACCCGCCTGCCCAATATTGCTTCTATTG
AATCCAGCTTCGCCTTCGGTCAGGTAAAAACTAAGACCAAGCTGCCAGTCAGGTAA

Upstream 100 bases:

>100_bases
TAGTTTTGCGCGGATTTTAAAAATTGCTATTTGCGAAGTAAGACATACACTTTGAGCAATAATATTGCCAAATTAAAATC
AATATTGATGGAATATGCCA

Downstream 100 bases:

>100_bases
TGAGTGTCACGATAACTTGGGTTTAAAGACCTCTAGATCATTATCGGCACATATAGAGCTCTGTCCATTGCTACTGACTC
AGTGCCACCTAATTTCCGCG

Product: bkd operon transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDEIDKKILAELQSNARLTNQELADRVALSPSPCLRRVRALEKQGIIRGYHASVDQEACGLPVNVFVLVKLEKPTEENMR
DFEQHIEVIDEVLECFLMTGNHDYLLHVVSESLKSYEQFIRKQLTRLPNIASIESSFAFGQVKTKTKLPVR

Sequences:

>Translated_151_residues
MDEIDKKILAELQSNARLTNQELADRVALSPSPCLRRVRALEKQGIIRGYHASVDQEACGLPVNVFVLVKLEKPTEENMR
DFEQHIEVIDEVLECFLMTGNHDYLLHVVSESLKSYEQFIRKQLTRLPNIASIESSFAFGQVKTKTKLPVR
>Mature_151_residues
MDEIDKKILAELQSNARLTNQELADRVALSPSPCLRRVRALEKQGIIRGYHASVDQEACGLPVNVFVLVKLEKPTEENMR
DFEQHIEVIDEVLECFLMTGNHDYLLHVVSESLKSYEQFIRKQLTRLPNIASIESSFAFGQVKTKTKLPVR

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=151, Percent_Identity=35.0993377483444, Blast_Score=109, Evalue=8e-26,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=36.6666666666667, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17267; Mature: 17267

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIDKKILAELQSNARLTNQELADRVALSPSPCLRRVRALEKQGIIRGYHASVDQEACG
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCC
LPVNVFVLVKLEKPTEENMRDFEQHIEVIDEVLECFLMTGNHDYLLHVVSESLKSYEQFI
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKQLTRLPNIASIESSFAFGQVKTKTKLPVR
HHHHHHCCCCHHHHHHHHHCHHCCCCCCCCC
>Mature Secondary Structure
MDEIDKKILAELQSNARLTNQELADRVALSPSPCLRRVRALEKQGIIRGYHASVDQEACG
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCC
LPVNVFVLVKLEKPTEENMRDFEQHIEVIDEVLECFLMTGNHDYLLHVVSESLKSYEQFI
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKQLTRLPNIASIESSFAFGQVKTKTKLPVR
HHHHHHCCCCHHHHHHHHHCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]