Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709709

Identifier: 218709709

GI number: 218709709

Start: 1846395

End: 1847174

Strand: Direct

Name: 218709709

Synonym: VS_1720

Alternate gene names: NA

Gene position: 1846395-1847174 (Clockwise)

Preceding gene: 218709708

Following gene: 218709712

Centisome position: 55.96

GC content: 45.64

Gene sequence:

>780_bases
ATGAGTGTATTTCTCCGTACGACGGCCCTAATGCTTCTGGTATTGAGCCGAGCGCCTGCATTCGCAGCAGCACCTGTTTC
AACAAGTTCAACAGATCAATCGCGTACAGCGTCATCGCAAAACCAAGTTTCATCAAATGTATTCCGCCATAGTCTAAGCG
GCTTGTATGGCATAAAAGCATTCGACTCACGTCCTACTCAGCCTTACACCGACTTCGATATTCTGTACAGCAAAGCGCAT
CAAGGCCAAGCTGAACTAGAAACTATCTGTAAAAGTACTGCCCTACTCACCAACTCTGAAGCGCTCTTTGCTGGCGTTAA
ATCTCAAGCTCGTGCAGAAGAAAAAATCGCTCTTGAGCTTGATGGTGACGTAACAAAAATTACCGACTTAGCCCGAGCAA
CTATCATCGCGAACGATGTAGAAAGCTTGGTTGAAGTTTACGAAGCGCTAAGCCGTGAAGCAGACGTTGTTAAGCTGAAA
AACAAGTTTAAATCGCCAGCTGATTCTGGCTACCGTGACCTTAACTTGTTGGTTCGTTTACCTAAAACCAACATCATTGC
AGAGGTTCAACTTCACTTGAAAGCGATTGCTGATGTGAAAAGTGGCCCTGAGCACGAACTCTACGAAATCATCCAAGGCA
TTGAGCGTCACGCAATTGCAGAACATCGCCCAATCAACGATATCGAAGCGGCACAAATCAATAGCCTAAGACGCCAATCT
TTAGAGCTTTACCAACAAGCATGGCAACCGTACATTACCACGCACATTAAAGCGGCATAA

Upstream 100 bases:

>100_bases
TTAATATGTAGTGAGTTAAGTTAAGCTGTTTTTACTCTTTTGCGTTACTGGTTACCCCTTTTGACTACCCGTTTTTGTAA
CCTTGTATTTTGGAGTTTGA

Downstream 100 bases:

>100_bases
CCACTGGCATAAACGCTTACCATAAACAAGAACGACAAAGGGCTGCATAATCGCAGCCCTTTCTTTTTATTAGTGCTCTC
GCGTTGCTTTCATTAGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSVFLRTTALMLLVLSRAPAFAAAPVSTSSTDQSRTASSQNQVSSNVFRHSLSGLYGIKAFDSRPTQPYTDFDILYSKAH
QGQAELETICKSTALLTNSEALFAGVKSQARAEEKIALELDGDVTKITDLARATIIANDVESLVEVYEALSREADVVKLK
NKFKSPADSGYRDLNLLVRLPKTNIIAEVQLHLKAIADVKSGPEHELYEIIQGIERHAIAEHRPINDIEAAQINSLRRQS
LELYQQAWQPYITTHIKAA

Sequences:

>Translated_259_residues
MSVFLRTTALMLLVLSRAPAFAAAPVSTSSTDQSRTASSQNQVSSNVFRHSLSGLYGIKAFDSRPTQPYTDFDILYSKAH
QGQAELETICKSTALLTNSEALFAGVKSQARAEEKIALELDGDVTKITDLARATIIANDVESLVEVYEALSREADVVKLK
NKFKSPADSGYRDLNLLVRLPKTNIIAEVQLHLKAIADVKSGPEHELYEIIQGIERHAIAEHRPINDIEAAQINSLRRQS
LELYQQAWQPYITTHIKAA
>Mature_258_residues
SVFLRTTALMLLVLSRAPAFAAAPVSTSSTDQSRTASSQNQVSSNVFRHSLSGLYGIKAFDSRPTQPYTDFDILYSKAHQ
GQAELETICKSTALLTNSEALFAGVKSQARAEEKIALELDGDVTKITDLARATIIANDVESLVEVYEALSREADVVKLKN
KFKSPADSGYRDLNLLVRLPKTNIIAEVQLHLKAIADVKSGPEHELYEIIQGIERHAIAEHRPINDIEAAQINSLRRQSL
ELYQQAWQPYITTHIKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28606; Mature: 28475

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFLRTTALMLLVLSRAPAFAAAPVSTSSTDQSRTASSQNQVSSNVFRHSLSGLYGIKA
CCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE
FDSRPTQPYTDFDILYSKAHQGQAELETICKSTALLTNSEALFAGVKSQARAEEKIALEL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEE
DGDVTKITDLARATIIANDVESLVEVYEALSREADVVKLKNKFKSPADSGYRDLNLLVRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEHEEEC
PKTNIIAEVQLHLKAIADVKSGPEHELYEIIQGIERHAIAEHRPINDIEAAQINSLRRQS
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LELYQQAWQPYITTHIKAA
HHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
SVFLRTTALMLLVLSRAPAFAAAPVSTSSTDQSRTASSQNQVSSNVFRHSLSGLYGIKA
CCHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE
FDSRPTQPYTDFDILYSKAHQGQAELETICKSTALLTNSEALFAGVKSQARAEEKIALEL
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEE
DGDVTKITDLARATIIANDVESLVEVYEALSREADVVKLKNKFKSPADSGYRDLNLLVRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEHEEEC
PKTNIIAEVQLHLKAIADVKSGPEHELYEIIQGIERHAIAEHRPINDIEAAQINSLRRQS
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LELYQQAWQPYITTHIKAA
HHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA